KEGG   Pseudomonas aeruginosa PAO1: PA1816
Entry
PA1816            CDS       T00035                                 
Symbol
dnaQ
Name
(RefSeq) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pae  Pseudomonas aeruginosa PAO1
Pathway
pae03030  DNA replication
pae03430  Mismatch repair
pae03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PA1816 (dnaQ)
   03430 Mismatch repair
    PA1816 (dnaQ)
   03440 Homologous recombination
    PA1816 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pae03032]
    PA1816 (dnaQ)
   03400 DNA repair and recombination proteins [BR:pae03400]
    PA1816 (dnaQ)
Enzymes [BR:pae01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PA1816 (dnaQ)
DNA replication proteins [BR:pae03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PA1816 (dnaQ)
DNA repair and recombination proteins [BR:pae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PA1816 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-GeneID: 877654
NCBI-ProteinID: NP_250507
UniProt: Q9L7T4 G3XD54
Position
1973470..1974210
AA seq 246 aa
MRSVVLDTETTGMPVTDGHRIIEIGCVELEGRRLTGRHFHVYLQPDREVDEGAIAVHGIT
NEYLKDKPRFREVANDFFEFIRGAQLIIHNAAFDIGFINNEFALLGQQDRSDVTEYCSVL
DTLLMARERHPGQRNNLDALCKRYGVDNSGRDLHGALLDAEILADVYLAMTGGQTSLSLA
GSGAEGDGSGRPMVSPIRRLDPARVATPVLRANAEELAAHAARLAVIEKSAGGPSLWAQL
EAPVGE
NT seq 741 nt   +upstreamnt  +downstreamnt
atgcgtagcgtcgtactggataccgaaaccaccggcatgccggtgaccgatggtcaccgg
atcatcgagatcggctgtgtcgagctggaggggcgccgcctgaccggtcgccacttccac
gtctacctgcaacccgatcgcgaggtcgacgaaggggcgatcgccgtccacggcatcacc
aacgaatacctgaaggacaagccgcgcttccgcgaggtcgccaacgatttcttcgaattc
atccgcggcgcccagctgatcatccacaacgcggcgttcgatatcggcttcatcaacaac
gagttcgccctgctgggccagcaggaccgctcggacgtgaccgagtactgctcggtgctg
gataccctgctgatggcccgcgagcgccatccgggccagcgcaacaacctcgatgcgttg
tgcaagcgctacggcgtggacaactccggtcgcgacctgcacggcgcgttgctcgacgcc
gagatcctcgccgacgtctacctggcgatgaccggcggccagaccagcctgtcgctggcc
ggcagcggcgcggaaggcgacggcagcggccggccgatggtcagcccgatccgtcggctc
gatccggcgcgggtagccaccccggtgctgcgcgccaacgccgaagagctggctgcgcat
gcggcgcggctggcggtgatcgagaagtcggcaggtggtccgtcactctgggcgcaactg
gaggcgccggtcggcgaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

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