KEGG   Pseudomonas aeruginosa PAO1: PA4410
Entry
PA4410            CDS       T00035                                 
Symbol
ddlB
Name
(RefSeq) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pae  Pseudomonas aeruginosa PAO1
Pathway
pae00470  D-Amino acid metabolism
pae00550  Peptidoglycan biosynthesis
pae01100  Metabolic pathways
pae01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pae00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PA4410 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PA4410 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PA4410 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pae01011]
    PA4410 (ddlB)
Enzymes [BR:pae01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     PA4410 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:pae01011]
 Precursor biosynthesis
  Amino acid ligase
   PA4410 (ddlB)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp ATP-grasp_4 ATP-grasp_3 RimK ATP-grasp_5 ATPgrasp_YheCD GARS_A TTL
Other DBs
NCBI-GeneID: 881282
NCBI-ProteinID: NP_253100
UniProt: Q9LCT6
Structure
Position
complement(4942677..4943636)
AA seq 319 aa
MNLCLDSLLNGTQDPKAFGRVAVLFGGKSAEREVSLKSGAMVLQSLLAAGVDAFGIDVGE
DLLQRLVEEKIDRAFIILHGRGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKRVW
LSLGLPTPDYAVLASEDDCREAAQRLGFPLIVKPAHEGSSIGMAKVGGLDELIAAWREAA
RYDSQVLVEQWISGPEFTVATLRGQVLPAIRLGTPHTFYDYDAKYLASDTRYQVPCGLDE
AKERELKELTARACDALGIQGWGRADVMQDAEGRFWLLEVNTAPGMTDHSLVPMAARAAG
LDFQQLVLAILADSREARG
NT seq 960 nt   +upstreamnt  +downstreamnt
atgaacctttgcctcgatagcctgctgaacggcacccaggatcccaaggcgttcggccgt
gtcgccgtgctgttcggcggcaagagcgccgagcgcgaggtgtcgctgaagtccggcgcg
atggtcctgcaatccctgctggccgccggggtcgatgccttcggcatcgatgtcggcgaa
gacctgctgcaacgcctggtcgaggagaagatcgaccgtgccttcatcattctccacggt
cgtggcggcgaggatggcagcatgcagggcctgctcgagtgcgcgggcattccctacacc
ggcagcggcgtgctggcctcggcgctggcgatggacaagctgcggaccaagcgggtctgg
ctcagcctcggcctgccgaccccggactacgcggtgctggccagcgaggatgactgccgc
gaagcggcgcagcgactgggtttcccgctgatcgtcaagccggctcacgaaggctcgagc
atcggcatggccaaggtcggcgggctcgacgaattgatcgcggcgtggcgcgaagcggcc
cgctacgactcgcaggtgctggtcgagcagtggatcagcggcccggaattcaccgtggcg
accttgcgcgggcaggtgctgccggcgatccgcctgggcacgccgcacaccttctacgac
tacgacgccaagtacctggccagcgatacccgctaccaggtgccctgcggtctcgacgag
gccaaggaacgcgagctgaaggaactcaccgcgcgcgcctgcgacgccctgggcatccag
ggctgggggcgggcggacgtgatgcaggacgccgaagggcgtttctggctgcttgaagtc
aacaccgcaccgggcatgaccgaccacagcctggtgcctatggccgcgcgggccgccggc
ctggatttccagcaactggtgctggcgatcctggccgatagccgcgaggcgaggggataa

  All links  
Gene (13)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (11)   
   Pfam (11)   
All databases (29)   

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