KEGG   Paenibacillus sp. FSL R7-0273: R70723_27020
Entry
R70723_27020      CDS       T03356                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
paea  Paenibacillus sp. FSL R7-0273
Pathway
paea03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paea00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    R70723_27020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paea03019]
    R70723_27020
   03009 Ribosome biogenesis [BR:paea03009]
    R70723_27020
Messenger RNA biogenesis [BR:paea03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     R70723_27020
Ribosome biogenesis [BR:paea03009]
 Prokaryotic type
  rRNA helicases
   R70723_27020
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CMS1
Other DBs
NCBI-ProteinID: AIQ49148
UniProt: A0A089KQA3
Position
complement(6035825..6037315)
AA seq 496 aa
MTNASFAAIGIQEDLVARLSEFGITAPSPVQEQTIPLLLEGRDVLAASQTGTGKTLAYLL
PLLQGINPEQRVVQKLVLAPTQELAMQILREAERYGDHRGIKVMGLIGGAAIKRQIDKLR
EHPQLVVGTPGRIRELIGLRKLKMHEVSTIVIDEADQMFQLSGAGEVAKIVSSALRTRQL
VMLSATIGPETKALASREMKNPAEIGIDPGVMTAQTLEHHYVVSEERNKIDMLRRVIRHH
NPKRAIVFVNATEDIAEVEAKLNHLGLTAAALYGDADKVTRSNVLAKFRDGKFRVLVASD
VAARGLDIEELTLVVSFDPAFDAEHYVHRAGRTGRMGKRGLSVTIVTEQQTFIMRKFARE
LDIQLEERALSAGKVLPADEARRPAPGQGSGGAGSPRRESAAPRGGKPVRTAAVQPDAPG
ARPAAARPDGEGAGAAVRREPQHGAGRAAGGRSGAGSAPAAGGGKARSSSAEREKNRKNK
GAPKWLKNKTTGGDGQ
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgactaacgcttcttttgcggccatcggcattcaggaagaccttgttgcccgattgtcg
gaattcggcattaccgccccgtctcccgttcaggagcagacgatcccgctgctgctggag
ggcagggacgtgcttgccgcttcccagaccggaacaggcaagacgctggcttacctgctg
ccgctgcttcaagggattaacccggagcagagagtggtgcaaaagctggtgctggccccg
acccaggagctggcgatgcagattctccgcgaggcggagcggtacggtgaccaccgcggc
atcaaggtgatggggctgatcggcggagccgccatcaagcgccagattgacaagctgcgc
gagcatccccagctggtggtcggcacgccgggacgcatccgcgagctgatcggcctgcgc
aagctgaagatgcatgaggtcagcacgattgttatcgatgaagctgaccagatgttccag
ctgagcggagccggtgaggtggctaagatcgtcagcagcgcgctgcgcacgcgccagctt
gtcatgctgtctgcgaccatcggtcctgagactaaggcactggcttcgcgtgagatgaag
aacccggccgagattggcattgatcccggcgtaatgaccgcccagacgctggagcatcac
tatgtggtgtctgaggagcggaacaagatcgatatgctgcgccgcgtcatccgccatcat
aaccccaagcgggcgattgtgttcgtcaatgcgacggaggacatcgccgaggtggaggcg
aagctgaaccatcttggacttacggcggcggcactgtacggtgatgccgacaaggttacg
cgcagcaacgtgctggcgaaattccgtgacggcaagttccgcgtactggtcgccagcgac
gtggcggcccggggtctggacattgaggagctgacgctcgtcgtcagcttcgatccggcc
tttgacgccgagcactatgtgcaccgggccggccgcaccgggcgcatgggcaaacgcggg
ctgtcggtgacgatcgtcaccgagcagcagacgttcatcatgcgcaagttcgcccgcgag
ctggatattcagctcgaggaacgggccctgtccgccggcaaggtgctcccggcggatgaa
gcccgcagaccggcgccaggccaaggcagcgggggtgcgggcagcccgcgccgggagagc
gcagcgccgcgcggcggcaagccggtgcggacggcggcggtgcagccggatgcaccgggt
gcaaggccggcagcagcgcggccggacggcgagggtgcgggcgcggcggtgcggcgcgag
ccgcagcacggcgcaggccgggccgcaggcggacgcagcggcgcgggttctgctccggct
gcgggcggcggcaaagcccgcagcagcagtgctgaacgcgaaaagaaccgcaagaacaaa
ggagcgccaaagtggctcaagaacaaaaccacgggaggtgacggtcaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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