KEGG T03789: NCGM1900

Pseudomonas aeruginosa NCGM 1900: NCGM1900_4442

Entry

NCGM1900_4442     CDS       T03789

Name

(GenBank) putative pseudouridylate synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

paeb Pseudomonas aeruginosa NCGM 1900

Brite

KEGG Orthology (KO) [BR:paeb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:paeb03009]
    NCGM1900_4442
   03016 Transfer RNA biogenesis [BR:paeb03016]
    NCGM1900_4442
Enzymes [BR:paeb01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     NCGM1900_4442
    5.4.99.29  23S rRNA pseudouridine746 synthase
     NCGM1900_4442
Ribosome biogenesis [BR:paeb03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    NCGM1900_4442
Transfer RNA biogenesis [BR:paeb03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    NCGM1900_4442

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

BAP23522

Position

complement(4705471..4706373)

AA seq 300 aa
MSSPSLPDASLRASTLHLPAGPWSTVLDCLCARFPAIDRDTWLARMQRGRVLDAEGRALG
PQAAYREGLRVHYFRELPAEAPIPFEARILYRDEHLLVADKPHFLPVMPAGGYVEQTLLA
RLARSTGNRDLVPLHRIDRHTAGLVLFSTNPGSRGRYQALFRERRIDKYYEAIAPALPRL
DFPLLRRTRLVPGEPFFRMREGEGEPNSETRIEVAERNGRWWRYRLYPVTGKKHQLRVHL
AALGAGIQNDGFYPELLDAEDSPDDYRRPLKLLARGLRFDDPLSGERRMFESGLRLDWQV

NT seq 903 nt +upstreamnt +downstreamnt
atgtcgtctccttccttgcccgacgccagtctccgcgccagcaccctgcatctgccggcc
ggcccctggagcaccgtgctcgattgtctctgcgcgcgtttcccggccatcgaccgcgac
acctggctggcgcgcatgcagcggggccgggtgctggacgccgaggggcgtgcgctgggc
ccgcaggcggcgtatcgcgaaggcctgcgtgtgcactacttccgcgagttgccggcggag
gcgccgatccctttcgaggcgcgcatcctgtaccgcgacgagcatctgctggtggcggac
aagccgcacttcctgccggtgatgccggccggcggctatgtcgagcagacgctcctggcg
cggctggcccgcagcaccggcaatcgcgacctggtgccgctgcatcggatcgaccggcat
accgccgggctggtgctgttctcgaccaatcccggcagccgcgggcgctaccaggcgctg
ttccgcgagcggcgtatcgacaagtactacgaagcgatcgctccggccttgccgcgactg
gacttcccgttgctgcgcaggacccgcctggtgcccggcgagccgttctttcgcatgcgc
gaaggcgagggcgagccgaacagcgagacgcgcatcgaggtcgccgagcgcaacggccgc
tggtggcgctaccggctgtatccggtgaccggcaagaagcaccagctgcgcgtgcacctc
gcggcactcggcgcgggtatccagaacgacgggttctatcccgagctgctggacgccgag
gacagccccgacgattaccggcggccgctcaagctgctggccagggggctgcgcttcgac
gacccgctgagcggggagaggcgtatgttcgaatccgggctgcggctcgattggcaggtg
tag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF

DBGET integrated database retrieval system