KEGG   Pseudomonas aeruginosa NCGM 1900: NCGM1900_4682
Entry
NCGM1900_4682     CDS       T03789                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
paeb  Pseudomonas aeruginosa NCGM 1900
Pathway
paeb03030  DNA replication
paeb03430  Mismatch repair
paeb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:paeb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCGM1900_4682 (dnaQ)
   03430 Mismatch repair
    NCGM1900_4682 (dnaQ)
   03440 Homologous recombination
    NCGM1900_4682 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paeb03032]
    NCGM1900_4682 (dnaQ)
   03400 DNA repair and recombination proteins [BR:paeb03400]
    NCGM1900_4682 (dnaQ)
Enzymes [BR:paeb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCGM1900_4682 (dnaQ)
DNA replication proteins [BR:paeb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NCGM1900_4682 (dnaQ)
DNA repair and recombination proteins [BR:paeb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NCGM1900_4682 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: BAP23762
Position
complement(4966684..4967424)
AA seq 246 aa
MRSVVLDTETTGMPVTDGHRIIEIGCVELEGRRLTGRHFHVYLQPDREVDEGAIAVHGIT
NEYLKDKPRFREVANDFFEFIRGAQLIIHNAAFDIGFINNEFALLGQQDRSDVTEYCSVL
DTLLMARERHPGQRNNLDALCKRYGVDNSGRDLHGALLDAEILADVYLAMTGGQTSLSLA
GSGAEGDGSGRPMVSPIRRLDPARVATPVLRANAEELAAHAARLAVIEKSAGGPSLWAQL
EAPVGE
NT seq 741 nt   +upstreamnt  +downstreamnt
atgcgtagcgtcgtactggataccgaaaccaccggcatgccggtgaccgatggtcaccgg
atcatcgagatcggctgtgtcgagctggaggggcgccgcctgaccggtcgccacttccac
gtctacctgcaacccgatcgcgaggtcgacgaaggggcgatcgccgtccacggcatcacc
aacgaatacctgaaggacaagccgcgcttccgcgaggtcgccaacgatttcttcgaattc
atccgcggcgcccagctgatcatccacaacgcggcgttcgatatcggcttcatcaacaac
gagttcgccctgctgggccagcaggaccgctcggacgtgaccgagtactgctcggtgctg
gataccctgctgatggcccgcgagcgccatccgggccagcgcaacaacctcgatgcgttg
tgcaagcgctacggcgtggacaactccggccgcgacctgcacggcgcgttgctcgacgcc
gagatcctcgccgacgtctacctggcgatgaccggcggccagaccagcctgtcgctggcc
ggcagcggcgcggaaggcgacggcagcggccggccgatggtcagcccgatccgtcggctc
gatccggcgcgggtcgccaccccggtgctgcgcgccaacgccgaagagctggctgcgcat
gcggcgcggctggcggtgatcgagaagtcggcaggtggtccgtcgctctgggcgcaactg
gaagcgccggtcggcgaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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