KEGG   Pseudomonas aeruginosa NCGM 1900: NCGM1900_5592
Entry
NCGM1900_5592     CDS       T03789                                 
Symbol
fis
Name
(GenBank) DNA-binding protein
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
paeb  Pseudomonas aeruginosa NCGM 1900
Brite
KEGG Orthology (KO) [BR:paeb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:paeb03000]
    NCGM1900_5592 (fis)
   03036 Chromosome and associated proteins [BR:paeb03036]
    NCGM1900_5592 (fis)
   03400 DNA repair and recombination proteins [BR:paeb03400]
    NCGM1900_5592 (fis)
Transcription factors [BR:paeb03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    NCGM1900_5592 (fis)
Chromosome and associated proteins [BR:paeb03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    NCGM1900_5592 (fis)
DNA repair and recombination proteins [BR:paeb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      NCGM1900_5592 (fis)
SSDB
Motif
Pfam: HTH_8 Xre-like-HTH RBD UPF0175
Other DBs
NCBI-ProteinID: BAP24655
Position
5900799..5901077
AA seq 92 aa
MSDNANLKQHLTTPTQEGQTLRDSVEKALHNYFAHLEGQPVTDVYNMVLCEVEAPLLETV
MNHVKGNQTKASELLGLNRGTLRKKLKQYDLL
NT seq 279 nt   +upstreamnt  +downstreamnt
gtgagcgacaacgccaacctgaaacagcacctcaccacgccgacgcaagaagggcagacc
ctgcgcgacagcgtggagaaggcattgcacaactacttcgcccacctcgaagggcagccg
gtcacggacgtttacaacatggtgctctgcgaagtcgaagcgccgctgctggaaaccgtc
atgaaccacgtcaaggggaaccagaccaaggcctccgagctactcggcctgaaccgcggg
accctgcgcaagaaactcaagcaatacgatcttctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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