KEGG   Pseudomonas aeruginosa NCGM 1900: NCGM1900_6352
Entry
NCGM1900_6352     CDS       T03789                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
paeb  Pseudomonas aeruginosa NCGM 1900
Pathway
paeb03030  DNA replication
paeb03410  Base excision repair
paeb03420  Nucleotide excision repair
paeb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:paeb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCGM1900_6352 (polA)
   03410 Base excision repair
    NCGM1900_6352 (polA)
   03420 Nucleotide excision repair
    NCGM1900_6352 (polA)
   03440 Homologous recombination
    NCGM1900_6352 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paeb03032]
    NCGM1900_6352 (polA)
   03400 DNA repair and recombination proteins [BR:paeb03400]
    NCGM1900_6352 (polA)
Enzymes [BR:paeb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCGM1900_6352 (polA)
DNA replication proteins [BR:paeb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     NCGM1900_6352 (polA)
DNA repair and recombination proteins [BR:paeb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     NCGM1900_6352 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCGM1900_6352 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: BAP25406
Position
complement(6725150..6727891)
AA seq 913 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFD
AKGPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQ
AFLSYQLATIKTDVELDVEIDKLYPGEPQREALIALYRELEFKNWLDDLLREAKEAGENG
EAETPIQAEVDYDVVLDQAGFDAWLKKLEEAELIAFDTETTSIDAQQAQVVGVSFAVKEG
EAAYVPLAHSYMGVPEQLDRDAVLRALKPLLEDPKKLKVGQHAKYDINVLANASTPIALR
GVAYDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGKGAKQLTFDQIAIEQAGP
YAAEDADVTLRLHQALWQKLEAIPSLARVLTDIEMPLVPVLARIERNGALVDANLLGIQS
RELGEKMVALERQAYDLAGQEFNLGSPKQLGAILYDKLGLPVLSKTATGQPSTAEAVLAE
LAEQDFELPKVIMQYRSMSKLKSTYTDRLPEQINLRTGRIHTSYHQAVAATGRLSSSDPN
LQNIPIRTAEGRRIRQAFVAPQGYKLLAADYSQIELRIMAHLAKDDGLLDAFRHDLDVHR
ATAAEVFGVPLEDVNGDQRRSAKAINFGLIYGMSAFGLAKQIGVERKEAQAYIDRYFARY
PGVLAYMERTRAQAAEQGFVETLFGRRLYLPEIHSKNGAMRKAAERTAINAPMQGTAADI
MKRAMVAVDNWLQESGLDARVILQVHDELVLEVREDLVEQVCEGIRPLMSGAATLDVPLV
VEAGVGSNWDEAH
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgagccaagcgcccctcgtcctggtggacggttcctcgtacctgtaccgcgccttccat
gccctgccgccgctgaccacctcgaccggcaagcccaccggtgcggtgaagggcgtgctg
aacatgctcctgagcctgcgcaagcagtacccggacagcccgttcgcggtggtcttcgac
gccaagggcccgaccttccgcgacgagctgttcgccgagtacaaggccaaccggccgtcg
atgcccgacgacctgcgggtccaggtcgagccgctgcatgccagcgtccgcgccctcggc
ctgccgctgctgtgcgtggagggggtcgaggccgacgacgtgatcggcaccctggcgcgc
agcagcgccgcggctgaccgcccggtggtgatttccaccggcgacaaggacatggcgcaa
ctggtcgacgggcacattacgctggtcaacaccatgaccggtagccgcctcgacgtggat
ggcgtgaaagagaaattcggcgtcggtcctgagctgatcatcgatttcctcgccctgatg
ggcgacaaggtcgacaacatccccggcgttcccggcgtcggcgagaaaaccgcgctgggc
ctgctgaccggcgtcggtggcggcctggaggtgctctacgccagcctggacaaggtgccc
gagctaccgatccgcggcgccaagggtttgccggcgaagctcgaggaaaatcgcgagcag
gcgttcctgtcctatcagttggcgaccatcaagaccgacgtcgaactggacgtggagatc
gacaagctgtatcccggcgagccgcagcgcgaagcgctgatcgccctgtaccgcgagctg
gagttcaagaactggctggacgacctcctgcgcgaggccaaggaggccggcgagaacggc
gaggcggaaacgcctatccaggccgaggtcgactacgacgtggtgctcgaccaggccggg
ttcgacgcctggctgaagaagctggaggaggccgagctgatcgccttcgataccgagacc
accagcatcgacgcccagcaggcgcaggtggtgggggtgtccttcgccgtgaaggagggc
gaggccgcctacgtgccgctggcccacagctacatgggcgttcccgagcaactggaccgt
gacgcggtgctgcgtgcgttgaaaccgctgctggaggatccgaagaagctcaaggtcggc
cagcatgccaagtacgacatcaatgtcctggccaatgccagcacccccatcgcgctgcgg
ggcgtagcctacgacaccatgctcgagtcctatgtgctggactccaccgccactcgccac
gacatggacagcctggccctgaagtacctcggccacagcaccatccgtttcgaggacatc
gccggcaagggcgccaagcaactgaccttcgaccagatcgccatcgaacaggccgggccc
tatgcggcggaggacgccgacgtgaccctgcgcctgcaccaggccctgtggcagaagctg
gaggcgatcccgtccctggccagggtcctgaccgacatcgagatgccgctggtaccggtg
ctggcgcggatcgagcgcaacggcgcgctggtcgacgccaacctgctgggcatccagagc
cgcgaactgggcgagaagatggtcgccctggagcgccaggcatacgacctggcagggcag
gaattcaacctcggctcgcccaagcagctcggcgcgatcctctacgacaagctcggcctg
ccggttctgagcaagaccgcgaccggccagccgtccaccgccgaggcagtgctcgccgaa
ctggccgagcaggacttcgagctgcccaaggtgatcatgcagtaccgctccatgagcaag
ctcaagagcacctacaccgaccgcctgcccgagcagatcaacctgcgtaccggacgcatc
catacctcataccaccaggcggtggcggctaccgggcggctgtcgtcgagcgacccgaac
ctgcagaacatcccgatccgtaccgcggagggccggcgcatccgccaggcgttcgtcgcg
ccgcagggctacaagctattggccgcggactactcgcagatcgagctgcggatcatggcc
cacctggccaaggacgatggcctgctggatgccttccgccacgacctggacgtacaccgc
gccaccgcggcggaagtcttcggcgtgccgctggaagacgtcaacggcgaccagcgacgc
agcgccaaggcgatcaacttcggattgatctacggcatgagcgccttcggcctggccaag
cagatcggcgtcgagcgcaaggaggcccaggcctacatcgaccgttacttcgcccgctac
cccggcgtcctggcgtacatggaacggacccgcgcccaggccgcggagcagggcttcgtc
gaaaccctgttcggccgtcgcctgtacctgccggagatccattcgaagaacggtgccatg
cgcaaggccgccgagcgcaccgcgatcaacgcgccgatgcagggcaccgcggcggacatc
atgaagcgcgccatggtcgctgtggataactggctgcaggaaagcggcctcgatgcccgg
gtgatcctccaggtgcacgacgaactggtgctggaagtgcgcgaggacctggtcgagcag
gtgtgcgagggaatccgcccgctgatgagcggcgcggcgaccctggacgtaccgctggtg
gtcgaggcgggtgtcggttcgaactgggacgaagcccactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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