KEGG   Pseudomonas aeruginosa PAO1-VE2: N296_5517
Entry
N296_5517         CDS       T03170                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
paei  Pseudomonas aeruginosa PAO1-VE2
Pathway
paei03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:paei00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    N296_5517 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paei03021]
    N296_5517 (rpoZ)
   03400 DNA repair and recombination proteins [BR:paei03400]
    N296_5517 (rpoZ)
Enzymes [BR:paei01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     N296_5517 (rpoZ)
Transcription machinery [BR:paei03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     N296_5517 (rpoZ)
DNA repair and recombination proteins [BR:paei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      N296_5517 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AGY66264
Position
6006979..6007245
AA seq 88 aa
MARVTVEDCLDNVDNRFELVMLATKRARQLATGGKEPKVAWENDKPTVVALREIASGLVD
ENVVQQEDIVEDEPLFAAFDDEANTEAL
NT seq 267 nt   +upstreamnt  +downstreamnt
atggcccgcgtcaccgttgaagactgcctggacaacgtcgataaccgtttcgagctggtc
atgctcgccaccaagcgcgcccgtcagctggctaccggcggcaaggagccgaaagtggcc
tgggaaaacgacaagccgaccgtcgtcgccctgcgcgagatcgcttccggcctggtcgat
gagaacgtcgtccagcaggaagacatcgtcgaggacgaaccgctgttcgcagcgttcgac
gacgaggccaacaccgaggccctgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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