KEGG   Paenibacillus sp. FSL H7-0737: H70737_16980
Entry
H70737_16980      CDS       T03359                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
paej  Paenibacillus sp. FSL H7-0737
Pathway
paej02024  Quorum sensing
paej03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paej00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H70737_16980
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    H70737_16980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paej03019]
    H70737_16980
   03036 Chromosome and associated proteins [BR:paej03036]
    H70737_16980
Messenger RNA biogenesis [BR:paej03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     H70737_16980
Chromosome and associated proteins [BR:paej03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    H70737_16980
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AIQ24391
UniProt: A0A089IJ88
Position
complement(3812462..3812701)
AA seq 79 aa
MNKSINIQDTFLNQLRKENIPATVYLTNGFQIRGIIKAFDNFTIVIDSDGRQQMVYKHAI
STFTPQRSVSLMQDNSNEE
NT seq 240 nt   +upstreamnt  +downstreamnt
atgaacaagtccattaacatccaagatacattcttgaaccaactacgcaaagaaaatatc
cctgctacagtatatttgaccaacggttttcaaatccggggaattattaaagcattcgac
aattttacaatcgttattgacagtgatggacgccagcaaatggtgtataagcacgcgatt
tccacttttacaccacagcgcagtgtgtcacttatgcaggacaatagtaacgaagaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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