KEGG T02970: T223

Pseudomonas aeruginosa LES431: T223_25365

Entry

T223_25365        CDS       T02970

Name

(GenBank) RTCB protein

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

pael Pseudomonas aeruginosa LES431

Brite

KEGG Orthology (KO) [BR:pael00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pael03016]
    T223_25365
Enzymes [BR:pael01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     T223_25365
Transfer RNA biogenesis [BR:pael03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    T223_25365
Prokaryotic type
   tRNA splicing ligases
    T223_25365

SSDB

Motif

Pfam:

RtcB DUF4514 DUF4402

Other DBs

NCBI-ProteinID:

AHC67600

Position

5415003..5416217

AA seq 404 aa
MKDMNILEVAGGKPIKLWTQGVPVEEEARQQLLNTAKMPFIFKHLAVMPDVHLGKGSTIG
SVIPTLGAIIPAAVGVDIGCGMIAARTSLVAADLPDNLHGLRSAIEQAVPHGKTFGRRDR
GAWHEVPEAADQAWKALAGRFKAITDKHPRLEKTNNRQHLGTLGTGNHFIEVCLDEADRV
WFMLHSGSRGVGNAIGNLFIELAKADMRQHIANLPDKDLAYFEEGSRHFDDYVEAVGWAQ
DFARQNRALMMHAVIEAARQVIRKPFEANLEAVDCHHNYVQKERHFGQEVLVTRKGAVSA
QKGQLGIIPGSMGAKSFIVRGLGNQEAFCSCSHGAGRTMSRTKAKKVFSVADQARATAHV
ESRKDADVIDEIPMAYKDIDRVMEAQRELVEVLHTLRQVVCVKG

NT seq 1215 nt +upstreamnt +downstreamnt
atgaaagacatgaatatcctcgaagtggccggcggcaagccgatcaagctctggacccag
ggcgtcccggtggaggaggaagcgcgccagcagttgctgaacacggcgaagatgcccttc
atcttcaagcacctggcggtgatgcctgacgtacacctgggcaagggctcgaccatcggt
agcgtgatccctaccctcggcgcgatcatcccggccgcggtgggcgtggatatcggctgc
ggaatgatcgccgcgcgcacctcgctggtcgccgccgacctgccggacaacctgcacggc
ctgcgcagcgccatcgagcaggcggtaccccacggcaagaccttcggccgccgcgaccgc
ggcgcctggcacgaggtaccggaggccgccgaccaggcctggaaggcgctcgccggtcgc
ttcaaggcgatcaccgacaagcacccgaggctggagaagaccaacaaccgccagcacctg
ggaaccctcggcaccggcaaccacttcatcgaggtctgcctggacgaggccgaccgcgtc
tggttcatgctgcacagcggttcgcgcggggtcggcaacgccatcggcaacctgttcatc
gaactggccaaggcggacatgcgccagcacatcgccaacctgccggacaaggacctggcc
tacttcgaggaaggcagccggcacttcgacgactacgtggaagcggtcggctgggcccag
gatttcgcccggcagaaccgcgcgctgatgatgcacgcggtgatcgaggcggcgcgccag
gtgatccgcaagccgttcgaagccaacctggaggcggtcgattgccaccacaactacgtg
cagaaggagcgccacttcggccaggaggtactggtcacccgcaaaggcgcggtgtccgcg
cagaagggccagctcggcatcattcccggctcgatgggggcgaagagcttcatcgtccgc
ggcctcggcaaccaggaagcgttctgctcgtgcagccacggcgccgggcggaccatgagc
cggaccaaggcgaagaaggtcttcagcgtcgccgaccaggcgcgcgccaccgcccacgtc
gaaagccgcaaggacgccgacgtgatcgacgagatcccgatggcctacaaggacatcgac
cgggtcatggaagcccagcgcgagctggtggaagtgctgcacaccctgcgtcaggtggtg
tgcgtgaaaggatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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