KEGG   Pseudomonas aeruginosa PA1: PA1S_25635
Entry
PA1S_25635        CDS       T02928                                 
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
paep  Pseudomonas aeruginosa PA1
Pathway
paep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PA1S_25635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paep03019]
    PA1S_25635
Enzymes [BR:paep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     PA1S_25635
Messenger RNA biogenesis [BR:paep03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     PA1S_25635
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: AHA18575
Position
5521297..5522700
AA seq 467 aa
MLKKLIQTIRSPLRRPRAVRTTPEVIGNNQHSLRRDQFSRNAVKVVEILQRAGYQAYVVG
GCVRDQMLGIAPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHVHFGREIIEVATFRAH
HPEGQDDGDSRASSNESGRILRDNVYGSLEDDAQRRDFTINALYFDVTSERLLDYANGVH
DIRNRLIRLIGDPEQRYLEDPVRMLRAVRFAAKLDFEIEKHSAAPIRRLAPLLREIPSAR
LFDEVLKLFLAGRAERTFELLVEYELFAPLFPASAKALQANPDYTGKLIRQALANTDARI
RQGKPVTPAFLFAALLWPALPARVAQLQEKGMPAIPAMQEAAHELISEQCQRIAIPKRFT
LPIREIWDMQERLPRRQGKRADLLLENPRFRAGYDFLLLRESAGEETEGLGQWWTDYQEV
SDSERRNMIRDLVSQEDGSAPRKRRRGGNSGRRRRGPRKEGSGGSGE
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgctgaaaaagctgatccagaccattcgttcccccctgcgccgtccgcgcgccgtccgt
acaaccccggaagtcatcggtaacaaccagcactccctgcgccgggaccagttcagccgg
aacgccgtcaaggtcgtcgagatcctccagcgggccggctaccaggcctacgtggtcggg
ggctgcgtacgcgaccagatgctcggcatcgctcccaaggacttcgatgtcgccaccagc
gccacgccggagcaggtccgcgccgaattccgcaacgcgcggatcatcggccgccgcttc
aaactggtacacgtgcacttcggccgcgagatcatcgaggtcgccaccttccgcgcccat
catccggaaggccaggacgatggcgatagccgcgcgtccagcaacgaaagcggccgcatc
ctgcgcgacaacgtctatggcagcctggaagacgacgcccagcgccgtgacttcaccatc
aatgccctgtacttcgacgtcaccagcgagcggctgctggactacgccaatggcgttcac
gacatccgcaatcgcctgatccgcctgatcggcgatccggagcagcgttatctggaagac
ccggtgcggatgctgcgggcggtacgtttcgccgccaagctcgacttcgaaatcgagaag
cacagcgccgcgccgattcgccggctggccccgctgctgcgggaaatcccttcggcgcgc
ctgttcgacgaggtgctcaagctgttcctcgccggccgggccgagcgcactttcgaactg
ctggtcgagtacgaactgttcgcgccgctgttcccggccagcgccaaggcactgcaggcc
aaccccgactacaccggcaagctgatccgccaggccctggccaataccgatgcgcgcatt
cgccagggcaagccggtaaccccggccttcctcttcgccgcgctgctctggccggccctg
ccggcgcgcgtcgcgcagttgcaggagaaaggcatgccggccatcccggcgatgcaggaa
gccgcccacgaactgatcagcgaacagtgccagcggattgccattcccaagcgtttcacc
ctgccgatccgcgagatctgggatatgcaggaacgtctgccgcgacgccagggcaagcgc
gccgacctgctcctggaaaacccgcgcttccgcgccggctacgacttcctcctgctgcgc
gaaagtgccggcgaggaaaccgaaggactcggccaatggtggaccgattaccaggaagtc
agcgacagcgagcggcgcaacatgatccgcgacctggtcagccaggaagacggcagcgcc
ccgcgcaagcggcgccgcggcggcaacagcggccgtcggcgccgcgggccgcgcaaggaa
ggcagcggcggaagcggcgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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