KEGG   Pseudomonas aeruginosa PA1: PA1S_28340
Entry
PA1S_28340        CDS       T02928                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
paep  Pseudomonas aeruginosa PA1
Pathway
paep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PA1S_28340 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paep03021]
    PA1S_28340 (rho)
   03019 Messenger RNA biogenesis [BR:paep03019]
    PA1S_28340 (rho)
Transcription machinery [BR:paep03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     PA1S_28340 (rho)
Messenger RNA biogenesis [BR:paep03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PA1S_28340 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 AAA_22 NACHT
Other DBs
NCBI-ProteinID: AHA19097
Position
complement(6124254..6125513)
AA seq 419 aa
MNLTELKQKPIAELLEMSDAMGLENMARSRKQDIIFALLKKHAKSGEEISGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIIGKIRPPKEGERYFALLKVDSIN
FDRPENAKNKILFENLTPLFPNERMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIASNITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATALVETGSKMDEVIYEEFKGTGNMELPLDRKIAEKRVFPAINI
NRSGTRREELLTSEDELQRMWILRKILHPMDEISAIEFLIDKLKQTKTNDEFFDSMKRK
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatctgaccgaactcaagcaaaagccgattgccgaactgctggaaatgtccgatgcc
atgggcctggaaaacatggcccgttcgcgcaagcaggacatcatcttcgccctgctgaag
aagcacgcgaaaagtggtgaagagatctccggcgatggcgtgctggagattcttcaggac
ggcttcggcttcctgcgctccgccgactcttcctacctggccggccccgacgacatctat
gtctcgccgagccagatccggcgcttcaacctgcgcacgggcgacaccatcatcggcaag
atccggccgccgaaagagggcgagcgttacttcgccctgctcaaggtcgactcgatcaac
ttcgatcgtccggagaatgcgaagaacaagattctcttcgagaacctgacgccgctgttc
cccaacgagcggatgaagatggaagccggcaacggctccaccgaagacctgaccggccgc
gtcatcgatctctgcgcgccgatcggcaagggccagcgcggcctgatcgtggcgccgccg
aaggcgggcaagaccatcatgctgcagaacatcgccagcaacatcacccgcaacaacccc
gaatgccacctgatcgtcctgctgatcgacgagcgccctgaggaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtcgcctcgacctttgacgaaccgccgacccgtcacgta
caggtcgccgagatggtgatcgagaaggccaagcgcctggtcgagcacaagaaggacgtg
gtcatcctgctcgactccatcacccgtctggcgcgggcctacaacaccgtgatccccagc
tccggcaaggtgctcaccggcggtgtcgacgcccatgccctggagaagccgaagcgcttc
ttcggcgccgcgcggaacatcgaagagggcggttctcttacgattctcgccacggcgttg
gtggaaaccggctcgaagatggacgaggtgatctacgaggaattcaagggtaccggcaac
atggaactcccattggatcgcaagatcgccgagaagcgcgtgttcccggccatcaacatc
aaccgttcgggtacccgccgcgaagagctgctgaccagcgaggacgagctccagcgcatg
tggatcctgcgcaagatcctgcacccgatggacgagatctccgcgatcgaattcctcatc
gacaagctcaagcagaccaagaccaacgatgagttcttcgattcgatgaaacggaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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