KEGG   Paenibacillus sp. FSL R5-0912: R50912_30650
Entry
R50912_30650      CDS       T03334                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
paeq  Paenibacillus sp. FSL R5-0912
Brite
KEGG Orthology (KO) [BR:paeq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:paeq03016]
    R50912_30650
Enzymes [BR:paeq01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     R50912_30650
Transfer RNA biogenesis [BR:paeq03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    R50912_30650
 Prokaryotic type
    R50912_30650
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-ProteinID: AIQ43860
UniProt: A0A089K7U4
Position
complement(6966135..6966914)
AA seq 259 aa
MRNLLMKVNYDGTHYDGFQTQPQGNTIQDKLEHAILHLTGETLKITGSGRTDAGVHAYGQ
PFNFITSSQIPLERWCLALNARLPQDIVVTEAWEVPLSFHSRRGAKRKTYRYTINGNRFP
DPFQRRWQHHHPVKLDIQSMEQGLAGLLGTHDYTSFASRKSTKTSHVRTIFEAYLEVDRS
MCRPGSSDQGVIHTYITGSGFLQHMVRIIMGTLMQVGEGKISADIVPAILAACDRAAAGP
TAVSKGLALWSVEYDENEI
NT seq 780 nt   +upstreamnt  +downstreamnt
atgcgcaatctattgatgaaagtcaattatgacggtacccactatgatggctttcagacc
cagcctcagggcaatacgattcaggacaagctggagcatgctattcttcatctgaccggt
gagacgctcaagataacgggctcaggacggacagatgcgggtgtgcacgcttatggccaa
ccttttaatttcataacctcttcccagatcccgctggaacgctggtgtctggctctgaac
gccaggcttccgcaggatatcgtggttaccgaggcctgggaggttccgctctcattccac
tcgcgtagaggagcgaagcgtaaaacctaccggtacacgattaacggcaaccggttcccg
gacccgttccagcggcgttggcagcatcatcatccggtgaagctggacattcagtcgatg
gagcagggactggcagggctgctgggtactcatgattacacttcgttcgcatcaaggaag
tctaccaagacatcgcatgtgcggacaatatttgaagcgtatcttgaagtggaccgcagc
atgtgccggccgggatcatccgatcagggagttattcatacgtatattacaggcagtgga
tttctacagcatatggtacgcattattatgggtacgctgatgcaagtgggggaaggtaaa
atcagcgcggacatagtccctgcaattcttgcggcatgtgaccgtgcggctgccggacct
acggccgtttcgaaaggtctggcactgtggagtgtagaatatgacgagaatgagatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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