KEGG   Pseudomonas aeruginosa SCV20265: SCV20265_2947
Entry
SCV20265_2947     CDS       T02971                                 
Name
(GenBank) ClpB protein
  KO
K11907  type VI secretion system protein VasG
Organism
paes  Pseudomonas aeruginosa SCV20265
Pathway
paes02025  Biofilm formation - Pseudomonas aeruginosa
paes03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:paes00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SCV20265_2947
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    SCV20265_2947
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paes02044]
    SCV20265_2947
Secretion system [BR:paes02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SCV20265_2947
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 Clp_N AAA_22 AAA_16 nSTAND3 Zeta_toxin ClpB_D2-small AAA_7 Sigma54_activat AAA_14 T2SSE ResIII AAA_25 IstB_IS21 NACHT AAA_28 DUF4140 FtsK_SpoIIIE Tropomyosin
Other DBs
NCBI-ProteinID: AHC77061
Position
complement(3129566..3132115)
AA seq 849 aa
MELAALIGRLNPDCRRALERAAQRCLQRTHHYVEIEHLLLELLDIDGGDFACLLPRFGLE
RDALVAEINLSLELFKAGNTRTPALSAHTIGLLEDAVVHASVLGQAQIRSGLLLLALLDR
EERRALLLNSASSLLRIPHEALQANLLEWIQASREQPPAPNRPAAGGDKPESAPDPLLDQ
YTQDLTAEARAGRIDPIVGRDGEIRQCVDILLRRRQNNPILVGAPGVGKTAVVEGLALRI
AAGEVPPSLQEVILRVLDLGLLQAGASMKGEFEQRLKGVIDAVRNSAQPIILFIDEAHTL
IGAGGAEGGSDAANLLKPALARGELRTLAATTWLEYKKYFEKDPALTRRFQLVQVEEPDE
ATAVEMLRGVAGKLELHHGVQIMDAAIVDAVKLSHRYISGRQLPDKAISVLDTACARVAL
GQHDVPPPLESLRHREQALEEELQRLRREQATGLDHSARITALESESGDNRRTIRELETR
WDEEREAVRELLDIRRELLALSESADAAKPDEELDGRIDHLAAELARLAAGLEAIRQDDP
LVPEQVDSRTVAAVIAGWTGIPVGKMLADEAHAIRSLAQRMGQRVMGQEAALGAIAQRIQ
AYRAGLSDPAKPVGVFLLPGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQ
LKGAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGL
VVDFRNTVILATSNVGAELLLDSPAEQVATPAFDERLRKVLLQTFRPAFLARMTVVPYRP
LEEATLEGIVVAKLEKLRERYKAATGKQFDFDPAIVKAVLAKCSAAGARDIENVLMAQVT
GKLAEWVLE
NT seq 2550 nt   +upstreamnt  +downstreamnt
atggaactcgccgccctgatcggccgcctcaaccctgactgtcgccgcgccctggagcgc
gccgcgcaacgctgcctgcaacgcacccatcattacgtagagatcgagcacctgctgctg
gagctgctggacatcgacggcggcgacttcgcctgcctgctgccgcgcttcggcctggag
cgcgacgccctggtcgccgagatcaacctgtcgctggagctgttcaaggccggcaatacc
cgcactccggcgctgtccgcgcacaccatcggcctgctcgaagacgccgtggtccacgcc
agcgtgctcggccaggcgcagatccgttccggcctgctgctgctcgccctgctcgaccgc
gaggagcgccgcgccctgttgctgaacagcgcgtcgtcgctgctgcggattccccacgag
gccttgcaggccaacctgctggagtggatccaggcctcccgcgaacagccgcccgcgccg
aaccgcccggcggcaggcggcgacaagccggaaagcgccccggacccgctgctcgaccag
tacacccaggacctcaccgccgaggcccgcgccgggcgcatcgaccccatcgtcgggcgc
gacggggagatccgccagtgcgtcgacatcctcctgcgccggcggcagaacaacccgatc
ctggtcggcgcgccgggcgtcggcaagaccgcggtggtcgagggcctggccctgcgcatc
gccgccggcgaggtgccgccgtcgttgcaggaggtgatcctgcgagtgctcgacctcggc
ctgttgcaggccggcgccagcatgaagggcgagttcgagcagcgcctcaagggcgtgatc
gacgccgtgcgcaacagcgcgcagccgatcatcctgttcatcgacgaggcgcacacgctg
atcggcgccggcggcgcggaaggcggcagcgacgccgccaacctgctcaagccggccctg
gcgcgcggcgagttgcgcaccctggcggccaccacctggctggaatacaagaaatacttc
gagaaggacccggcgctgacccggcgcttccagctggtccaggtcgaggagccggacgag
gccaccgccgtggagatgctgcgcggcgtcgccggcaagctggaactgcatcacggcgtg
cagatcatggacgcggccatcgtcgatgcggtgaagctgtcgcatcgctacatctccggc
cgccagttgccggacaaggcgatcagcgtgctcgacaccgcctgcgcgcgggtcgccctc
ggccagcacgacgtgccgccgccgctggaaagcctgcgccatcgcgagcaggcgctggaa
gaggaattgcagcggctgcgccgggaacaggccaccggcctcgaccacagcgcgcgtatc
accgccctggaaagcgagtcgggcgataaccgccggaccatccgcgagctggagacccgc
tgggacgaggaacgcgaagcggtgcgcgaactgctcgacatccgccgcgaactgctggcc
ctcagcgaaagcgccgacgcggccaagcccgacgaggaactggacggtcgcatcgaccac
ctggccgccgaactggcgcgcctggcggccggcctcgaagccatccgccaggacgacccg
ctggttcccgagcaggtggactcgcgtaccgtggccgcggtgatcgccggctggaccggc
atcccggtgggcaagatgctcgccgacgaagcccacgccatccgttccctggcgcaacga
atgggccagcgggtgatgggccaggaggccgccctgggcgccatcgcccagcgcatccag
gcctatcgcgccggactcagcgacccggccaagccggtcggcgtattcctcctgcccggc
cccaccggcgtgggcaagaccgagaccgcctacgccctggccgacgccctttacggcggc
gaacgcaacctgatcagcatcaacctctccgagtaccaggaggcccacaccgtcagccag
ctcaagggcgccccgcccggctacgtcggctacggcagcggtggcgtgctcaccgaagcg
gtgcgccgcaagccctattcggtggtgctgctggacgagatcgagaaagcccatccggac
gtgctggaagccttctacaacgtgttcgacaagggcgtgatggaagacggcaccggcctg
gtggtggacttcaggaacaccgtgatcctcgccaccagcaacgtcggcgccgaactgctg
ctggacagcccggccgaacaggtcgccaccccggccttcgacgagcgcctgcgcaaagtc
ctgctgcaaaccttccgcccggcgttcctcgcgcgcatgaccgtggtgccttaccggccg
ctggaggaagccaccctggaaggcatcgtcgtggccaagctggaaaaactgcgggaacgc
tacaaggccgctaccggcaaacagttcgacttcgacccggccatcgtcaaggccgtgctc
gccaagtgcagcgcggcgggcgcgcgggatatcgagaacgtgctgatggcgcaggtgacg
gggaagttggcggagtgggtgttggagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (30)   

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