KEGG   Pseudomonas aeruginosa SCV20265: SCV20265_3994
Entry
SCV20265_3994     CDS       T02971                                 
Name
(GenBank) N-3-oxododecanoyl-L-homoserine lactone quorum-sensing transcriptional activator LasR
  KO
K18304  LuxR family transcriptional regulator, quorum-sensing system regulator LasR
Organism
paes  Pseudomonas aeruginosa SCV20265
Pathway
paes02024  Quorum sensing
paes02025  Biofilm formation - Pseudomonas aeruginosa
Module
paes_M00769  Multidrug resistance, efflux pump MexPQ-OpmE
Brite
KEGG Orthology (KO) [BR:paes00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SCV20265_3994
   02025 Biofilm formation - Pseudomonas aeruginosa
    SCV20265_3994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:paes03000]
    SCV20265_3994
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:paes01504]
    SCV20265_3994
Transcription factors [BR:paes03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    SCV20265_3994
Antimicrobial resistance genes [BR:paes01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexPQ-OpmE [MD:M00769]
    SCV20265_3994
SSDB
Motif
Pfam: GerE Autoind_bind Sigma70_r4_2
Other DBs
NCBI-ProteinID: AHC78104
Position
complement(4251799..4252173)
AA seq 124 aa
MPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPV
VLTSREKEVLQWCAIGKTSWEISVICNCSEANVNFHMGNIRRKFGVTSRRVAAIMAVNLG
LITL
NT seq 375 nt   +upstreamnt  +downstreamnt
atgccgctgcatggtgctcgcggcgaactcggcgcgctgagcctcagcgtggaagcggaa
aaccgggccgaggccaaccgtttcatggagtcggtcctgccgaccctgtggatgctcaag
gactacgcactgcagagcggtgccggactggccttcgaacatccggtcagcaaaccggtg
gttctgaccagccgggagaaggaagtgttgcagtggtgcgccatcggcaagaccagttgg
gagatatcggttatctgcaactgctcggaagccaatgtgaacttccatatgggaaatatt
cggcggaagttcggtgtgacctcccgccgcgtagcggccattatggccgttaatttgggt
cttattactctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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