KEGG   Pseudomonas aeruginosa SCV20265: SCV20265_5020
Entry
SCV20265_5020     CDS       T02971                                 
Symbol
trbF
Name
(GenBank) Conjugative transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
paes  Pseudomonas aeruginosa SCV20265
Pathway
paes02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:paes00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SCV20265_5020 (trbF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:paes02044]
    SCV20265_5020 (trbF)
Secretion system [BR:paes02044]
 Type IV secretion system
  Trb secretion system protein
   SCV20265_5020 (trbF)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: AHC79126
Position
complement(5323745..5324449)
AA seq 234 aa
MRFKRPQVRYADTPQPATPYQSAAQVWDERIGSSRVQAKNWRLMAFGCLLLALLMAGGLV
WRSAQSIVTPYVVEVDNAGQVRAVGEAATPYRPSDAQVAYHLGRFIELVRSLSIDPIVVR
QNWLDAYDYTTDKGAVVLNDYARTNDPFARIGKESVTVQITSVTRASDTSFNVRWTERRF
VNGAAAGTERWNAVISIVQQTPRTEQRLRKNPLGIYVNGLSWSRELDSSEGAKP
NT seq 705 nt   +upstreamnt  +downstreamnt
atgcgattcaaacgcccgcaggtgcgctatgccgacacgccgcagcctgcgaccccgtat
caatccgccgcgcaagtgtgggacgagcgcatcggttcgtcccgcgtgcaagcgaagaac
tggcggctgatggctttcggctgcctgctgctggcgctgctgatggccggcggcctggtg
tggcgctccgcgcaatccatcgtcacgccctacgtggtggaggtggacaacgcgggccaa
gtgcgcgccgtcggcgaagccgccacgccgtaccggcccagcgatgcacaagtggcctac
cacctgggccgcttcatcgagctggtgcgctcgctgtccatcgaccccattgtcgtgcgc
cagaactggctcgacgcctacgactacaccaccgacaagggcgccgtggtgctcaacgac
tacgcgcgcaccaacgacccgttcgcgcgtatcggcaaggaatccgtcacggtgcagata
accagcgtgacccgcgccagcgacacgtctttcaacgtgcgctggacggaacggcgcttc
gtcaacggcgccgcggcgggcactgaacgctggaacgccgtgatttccatcgtgcagcag
accccgcgcaccgaacagcgcctgcgcaagaaccccctgggcatctacgtcaacggcctg
tcgtggagccgtgagctggattcttccgaaggagcaaaaccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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