KEGG   Pseudoalteromonas agarivorans: PAGA_a0118
Entry
PAGA_a0118        CDS       T06137                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
paga  Pseudoalteromonas agarivorans
Pathway
paga00300  Lysine biosynthesis
paga00470  D-Amino acid metabolism
paga01100  Metabolic pathways
paga01110  Biosynthesis of secondary metabolites
paga01120  Microbial metabolism in diverse environments
paga01230  Biosynthesis of amino acids
Module
paga_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:paga00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PAGA_a0118 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PAGA_a0118 (dapF)
Enzymes [BR:paga01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PAGA_a0118 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF DHODB_Fe-S_bind
Other DBs
NCBI-ProteinID: ATC80727
UniProt: A0A290RQC3
Position
I:complement(105892..106722)
AA seq 276 aa
MLVNFSKMHGLGNDFVVIDNITQNVFLSRDQIKKLADRHFGIGFDQLLMVEAPYSPDLDF
HYRIFNADGNEVEQCGNGARCFARFVRMKGLTNKHKISVSTKSGNLTLYIEKDGQVTVNM
GHPNFEPAKIPLKASKRELTYIIRAQEHTVFSGAVSMGNPHCVLEVDDIATAQVEVLGPL
LENHERFPNRANIGFMQVVSQDHIKLRVWERGVSETLACGTGACAAMVIGHIQSKLNTTV
QVDLPGGTLQVRWSGEGHPVRMTGPAEHVFDGQVAL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgttagttaatttttccaaaatgcacggcttaggcaacgactttgttgtaattgataac
attacacaaaatgtatttttgtctcgcgatcaaatcaaaaaactggctgatcgccacttt
ggtattggctttgaccaattacttatggttgaagccccttactcccctgatctcgacttc
cattaccgtatatttaatgccgatggcaatgaagtagaacaatgcggaaatggcgcacgc
tgttttgcccgctttgtgcgcatgaaaggcttaactaacaagcacaaaattagtgtctcg
actaagtcgggcaacctcacgctatatatagaaaaagacggccaagtgacggtaaacatg
ggccatcctaattttgagcctgctaaaatcccgcttaaagccagcaagcgagaactaact
tatataataagagctcaagagcacacagtatttagtggcgctgtgtctatgggtaacccg
cattgcgtgttagaagttgacgatatagctaccgcacaagttgaggtgcttggtccgctg
cttgaaaaccacgaacgttttccaaatcgtgccaatattggctttatgcaagtggtctcg
caagatcatattaaacttagagtgtgggagcgcggcgttagtgaaaccctagcgtgtggc
acgggtgcctgcgcagcaatggtaattggccacattcaaagcaaacttaacaccacggta
caagttgatttacccggcggcacattacaagtacgttggagcggcgaaggccaccctgtc
cgcatgaccggcccagccgagcatgtatttgatgggcaagttgccttatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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