KEGG   Pseudoalteromonas agarivorans: PAGA_a2087
Entry
PAGA_a2087        CDS       T06137                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
paga  Pseudoalteromonas agarivorans
Pathway
paga03030  DNA replication
paga03430  Mismatch repair
paga03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:paga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAGA_a2087 (dnaQ)
   03430 Mismatch repair
    PAGA_a2087 (dnaQ)
   03440 Homologous recombination
    PAGA_a2087 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paga03032]
    PAGA_a2087 (dnaQ)
   03400 DNA repair and recombination proteins [BR:paga03400]
    PAGA_a2087 (dnaQ)
Enzymes [BR:paga01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PAGA_a2087 (dnaQ)
DNA replication proteins [BR:paga03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PAGA_a2087 (dnaQ)
DNA repair and recombination proteins [BR:paga03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PAGA_a2087 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like CAF1 RNase_H_2
Other DBs
NCBI-ProteinID: ATC82411
UniProt: A0A290RYB7
Position
I:complement(1963571..1964275)
AA seq 234 aa
MAKQSYFDWQAHYKTLANNAKNEHLKAFYQHAYGDTHTPIKDISFVALDFETTGLNSEVD
DIVSIGLVPFTMQRVYCTHAKHWVVQPRKSLSEESIVIHGITHSEVDDAPDLTSRLGPLL
NALSGKVVVVHYAAIERHFLNNALLTRINEGIQFALVDTMEIEQRALRARQGLIGRLFNQ
KVGSLRLTDCRSRYSLPAYHNHNALTDALATAELLIAQLQYHYRDDTPLAELLS
NT seq 705 nt   +upstreamnt  +downstreamnt
atggctaagcaatcgtattttgactggcaggctcattataaaacactggctaacaacgct
aaaaatgagcatttaaaagcgttttatcagcacgcttatggtgatacgcacacgcccata
aaagacatttcgtttgtggctcttgattttgagacaaccggtctaaatagtgaggtggac
gatatagtcagtattggcttagtcccctttacaatgcaaagagtatattgcacacatgct
aagcattgggtagtgcagcctcgtaaaagcttaagtgaggagtcgattgttattcatggt
attacgcattcagaagtggatgatgctcccgatttaacctctcgactagggccgctactt
aatgcacttagtggtaaagtggtggtggtgcattatgcagcgatagagcggcacttttta
aacaatgcattacttacgagaattaacgaagggatccagtttgcattagtcgataccatg
gaaattgagcaacgagcgttgcgcgcccgccaaggcttaatagggcgtttgtttaatcaa
aaggtaggctcacttaggctcacagattgccgcagtcgatactctttgcctgcttatcat
aatcacaatgcgctaactgatgcattagccacagcagagctgttgattgcacagctgcaa
taccattaccgcgatgatacgccattggctgaattactaagttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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