KEGG   Pseudoalteromonas agarivorans: PAGA_a2430
Entry
PAGA_a2430        CDS       T06137                                 
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
paga  Pseudoalteromonas agarivorans
Pathway
paga03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:paga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PAGA_a2430 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paga03400]
    PAGA_a2430 (uvrC)
DNA repair and recombination proteins [BR:paga03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PAGA_a2430 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH HHH_5 HHH_2 HHH_3 DUF4602 GIY_YIG_2 WKF
Other DBs
NCBI-ProteinID: ATC82704
UniProt: A0A290RPI4
Position
I:complement(2307001..2308824)
AA seq 607 aa
MSEFDHAQFLKTLSSEPGVYRMLDSEQQVIYVGKAKNLKKRVSSYFRSNLTDSKTRVLVS
NICDIEVTLTNTETEALLLENNLIKKYQPRYNILLRDDKSYPYILLTSHKHPRLAFHRGS
RKVKGEYFGPFPSAGAVSESLRLMQKIFPVRQCEDAYYRARSRPCLQYQLKRCSAPCVNK
VTEQEYGEQVDYVRKFLTGKSHEVIADLIKKMEAASKDLNFELAAKVRDQIMLLRKMQEQ
QSISGNFAEMDVVGFAHLNGLNGIHLLMIRDHKVLGSKTYFPKVPKDSGQEEILTSFLGQ
YYLAPGATGRIAKEIILPFEIEESSALSEALTQISERKVSLKVVTRGERAQYLQLANKNA
LNSITVKQSTQDSINKRYAQLKATLGLDDINRMECFDISHTMGENTVASCVVFDSQGPNN
KEYRRYNVTGITGGDDYAAMEFALNKRYNKVVDEDKIPDVIFIDGGKGQLGRAEQYFATW
PHAKMPLLVGVAKGTSRKPGLETLLIDGGRKTIPMDSDAPALHLIQHIRDESHRFAIAGH
RNKRQKQRTQSLLEEINGVGSKRRQTLLKYLGGMQGVKAANIEQLKKVPGISPDMAEKIF
NHLHDKG
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgtctgaattcgatcacgcccaatttttaaaaacgctatcaagtgaaccgggtgtatac
cgtatgcttgatagtgaacaacaagttatttatgtcggtaaagctaaaaacttaaaaaaa
cgggtaagtagctactttagatctaatctaaccgacagtaaaacccgtgtgctagtgagt
aatatttgcgatattgaagttacgctcacaaacaccgaaaccgaagccctgctgcttgaa
aacaaccttataaaaaaatatcagccgcgttataacattttattacgtgatgataagtca
tacccctatatattacttaccagtcataaacatccgcgtttagcctttcatagaggcagt
cgcaaggtaaaaggcgagtactttgggcctttcccaagtgctggcgcagtgtcggaaagt
ttgcgtttaatgcaaaaaatatttcctgtacgtcagtgcgaagatgcctattaccgtgcc
agaagccgcccgtgtttacagtatcagctaaagcgctgctcagcaccgtgtgttaataaa
gtgacagagcaagagtacggcgaacaagttgattatgtacgtaagtttttaacaggtaag
tcgcacgaagtaatagccgatttaataaaaaaaatggaagcggcgagtaaagaccttaac
tttgagctcgcagctaaagtgcgtgaccaaattatgctactgcgcaaaatgcaggagcag
cagtctatttcaggtaattttgctgaaatggatgtggtaggttttgcacacttaaatgga
ttaaatgggattcatttattaatgatccgtgatcataaagtgctaggcagtaaaacctat
tttccaaaagtgcctaaagattcgggacaagaggaaatactcacttcgtttttagggcaa
tattatttagcgcctggtgcgacagggcgcatagcaaaagagattattttaccgttcgag
attgaagaaagtagcgcattgagtgaagcgcttacgcaaattagtgagcgtaaagtatcg
cttaaagtggtcacccgcggagagcgagcacaatatcttcagcttgctaataaaaacgca
ttaaacagcattaccgttaaacaaagtacgcaagactctataaataaacgttatgcacaa
ttaaaagcgaccctaggcttagatgatataaacagaatggaatgttttgatatcagccat
accatgggggagaacacagtagccagttgtgtagtatttgattcgcaagggccaaataac
aaagagtacagacgctacaacgtaacgggtataaccggcggtgatgattacgcggcaatg
gagtttgcactgaacaaacgctacaacaaagtggtagatgaagacaaaatccctgacgtt
atattcattgacggtggtaaagggcaactaggccgtgcagagcagtattttgccacgtgg
ccacatgctaaaatgccgctgttagtaggtgtagcaaaaggcacaagcagaaagccaggc
cttgaaaccttattaattgatggcgggcgaaaaacgattcctatggattcggatgcgcca
gcactacatttaatccagcatattcgcgatgagtcgcaccgatttgctattgcagggcac
cgtaataagcgccaaaaacagcgcacgcaatcattattagaagagatcaacggagtaggt
tctaagcgccgccaaacattattaaaatatttagggggcatgcaaggggtaaaagctgct
aatatagaacagttaaagaaagttcctgggatcagtcctgacatggctgagaagatattt
aaccatttgcatgacaagggctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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