KEGG   Pantoea vagans FDAARGOS_160: AL522_03860
Entry
AL522_03860       CDS       T04302                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
pagg  Pantoea vagans FDAARGOS_160
Pathway
pagg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pagg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AL522_03860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pagg03400]
    AL522_03860
Enzymes [BR:pagg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AL522_03860
DNA repair and recombination proteins [BR:pagg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AL522_03860
SSDB
Motif
Pfam: PriA-like_WH PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_22 AAA_30 AAA_19 zinc-ribbons_6 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AMG56831
Position
75035..77230
AA seq 731 aa
MPVVQVALPVPLPRLFDYLPPQGAQPVIGGRVSVPFGNRRMIGIVVAFRDSSDLPEAQLK
RVVEVLDSESLYPPSLWRILNWAASYYHSPQGEVLSHAIPVLLRQGKAAQDNPLWRWAIT
EQGRATTPESLKRAPKQQQALAALRQQPLYRHQVNEHDLTEATLQALRAKGLCELHEHQP
QMHDWRTTYAVKGERLRLNTDQAMAVGAIRADDEHYSAWLLAGITGSGKTEVYLSVLENV
LARGKQALVLVPEIGLTPQTIARFRERFDAPIDVLHSALNDSERLAVWLRARRGETAIVI
GTRSALFTPLARPGVIIIDEEHDSSYKQQEGWRYQARDLAVFRAHEEDIPIVMGSATPAL
ETLHNVRSGKYRQLDLTKRAGNARPALQQLIDLKGVQLIGGLAPGLIGKMRQHLQADNQV
LLFLNRRGFSPALLCHDCGWIAECTRCDRYYTLHQYHRQLRCHHCDSQRPLPNQCPQCGS
THLLPVGVGTEQLEQQLGTLFPGVPVSRIDRDTTSRKGALEQHLADVHRGGARILVGTQM
LAKGHHFPDVTLVSLLDVDGALFSADFRAAERFAQLYTQVAGRAGRAGKQGEVLLQTHHP
EHPLLQTLLHQGYSAFAQQALLERQAVHLPPWSRHALFRAEDMDNQQAAEFLQQLRNLLE
ASPLNDKAMWFMGPLPALQPKRSGRWRWQLLLQHPSRQRLQQLLSSSLPLVSTLPAARKV
KWTLDIDPTES
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgcccgtcgttcaggttgccctgcccgtccccttgccacgcctgtttgactatctgccg
cctcagggtgcgcagccggtcattggcgggcgcgtgagtgtgccctttggcaatcgcaga
atgatcgggattgtggtcgcctttcgtgacagcagcgatctgccggaagcacagctcaaa
cgcgtggttgaggtgctggacagtgagtctctctatccgccgtcgctgtggcgcatcctg
aactgggccgccagctactatcactctccgcagggcgaagtgctgagccacgcgattccg
gtgctgctgcgccagggcaaagcggcgcaggacaatcccctgtggcgctgggcaatcact
gaacagggccgggcaaccacgccggaaagtttaaagcgggcaccaaaacagcaacaggcg
ctggcagcactgcgtcagcaaccgctctatcggcatcaggtcaatgaacacgatctcacc
gaggcgacattacaggcattgcgggccaaagggttatgcgaactgcatgagcatcagccg
cagatgcacgactggcgcaccacctatgccgtgaaaggcgaacgtctgcgattaaacacc
gatcaggcgatggccgtgggtgcgattcgggcagatgatgaacattattccgcctggctg
ctggcgggcatcaccggctccggcaaaaccgaggtttacctcagcgtgctggaaaatgtg
ctggcacgtggtaaacaggcgctggtactggtgccggagattggcttaaccccgcagacg
attgcccgctttcgcgagcgttttgatgcgcccattgatgtgctgcactctgcattaaat
gacagtgaacggctggcggtgtggttacgtgcccggcgcggcgaaacggcgattgtgatt
ggcacccgttcggcgctgtttacgccactggctcgtcctggcgtcatcattattgatgaa
gagcatgacagctcctataaacagcaggaaggctggcgctatcaggcgcgcgatctggct
gtgttccgtgcacatgaagaggatatcccgattgtcatgggatcggcgacaccggctctg
gagacactgcacaatgtccgcagcggcaagtatcgccagctcgacctgacaaaacgcgct
ggcaacgcccgaccggcgctgcaacagcttatcgacttaaaaggcgtgcagctgatcggt
ggcctggcgcccggcctgattggtaaaatgcgccagcatctgcaggccgacaatcaggtg
ttgctgttccttaaccgccgcggcttttcgcccgccctgctttgtcacgactgcggctgg
attgccgagtgtacccgctgtgaccgctactacaccctgcatcagtaccaccgccagcta
cgctgccatcattgcgacagccagcgtccgctgcctaatcagtgtccgcagtgtgggtct
actcatctgctgccggtcggcgtcggcactgagcagctggagcagcagctcggcacactc
ttccccggcgtgccggtgtcgcgcatcgatcgtgataccaccagccgcaaaggggcgctg
gagcagcatctggctgacgttcatcgcggcggcgcacgtatcctggtcggcacccagatg
ctggccaagggccaccacttccccgatgtcacactggtctcgctgctggatgttgatggt
gcgctgttctcagccgatttccgtgcggcagagcgctttgctcagctctacacccaggtc
gctggccgtgctggccgtgccggaaagcagggcgaagtgttgctgcagacgcaccatccg
gaacaccccttattgcagacactgctgcatcagggttattcggccttcgcgcagcaggcg
ctgctggagcgacaggcggttcacctgccgccctggagccgccatgcgctgttccgcgcg
gaagatatggataaccagcaggcagccgaatttttgcaacaacttcgcaacctgctggag
gcgagcccgctgaatgacaaagcgatgtggtttatgggtccgttgcccgctttgcagccc
aaacgcagtggacgctggcgctggcaactgctgttgcagcatccttcccggcaacgtctg
caacagttactgagcagttcgttgccgctggtttcaacgcttcccgctgcgcgcaaagtg
aaatggacgctggatatcgaccccaccgagagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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