KEGG   Pyrobaculum aerophilum: PAE0880
Entry
PAE0880           CDS       T00073                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase (endonuclease III, PaNth)
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pai  Pyrobaculum aerophilum
Pathway
pai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PAE0880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pai03400]
    PAE0880
Enzymes [BR:pai01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PAE0880
DNA repair and recombination proteins [BR:pai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PAE0880
 Prokaryotic type
     PAE0880
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 HHH_8 IMS_HHH RecR_HhH Transposase_20
Other DBs
NCBI-ProteinID: AAL63095
UniProt: Q7LX30
Position
complement(507117..507788)
AA seq 223 aa
MSELIEIVDRYVELRLNEFIAPVVWRREKNLFKMLVAVVLSQNTSDKNAFKALENLEKQV
GTITPQALLELPIEALEELIKPAGMYRQRARNLKALAEAFIQLGLTPERLVEMGPERARE
LLLSLPGVGKKTADVVLVNLGLPAFPVDTHITRIAKRWGIGEKYDEISRWFMERLPRDKY
LDFHLKLIQFGRDVCRARNPKCGQCPIGAKCPSFKSAGRSPVT
NT seq 672 nt   +upstreamnt  +downstreamnt
gtgtctgaattaatcgaaatagtggacagatatgtcgagctgaggcttaatgagttcatc
gccccagttgtgtggcggagagagaagaacttgttcaaaatgctagtcgccgtggtgctg
agccaaaacacctccgacaaaaacgcctttaaagcgctggagaatttagagaagcaagta
gggacaattacgccgcaagccttgctggaattgccaattgaggcgcttgaggagttaatc
aagccggcaggcatgtatagacaacgcgcccgtaatttaaaagccctggcagaggccttt
attcagctgggcctaacgccggagagactcgtggagatgggccccgagagggctagggaa
ttgctactcagcctgccgggggttggcaaaaagacggcagatgtggttctggtaaactta
ggccttccagctttcccagtcgacactcacatcactagaattgcaaagcggtgggggata
ggcgagaagtacgatgaaataagccgttggtttatggagagactccccagggataaatat
ctcgattttcacctaaagctaattcagttcggccgagatgtgtgcagagccaggaatccc
aaatgcggtcagtgccccatcggcgcgaaatgcccttcgtttaaatcagccggcaggtca
ccggtcacatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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