KEGG   Pantoea ananatis AJ13355: PAJ_0835
Entry
PAJ_0835          CDS       T01969                                 
Symbol
holB
Name
(GenBank) DNA polymerase III delta' subunit HolB
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
paj  Pantoea ananatis AJ13355
Pathway
paj03030  DNA replication
paj03430  Mismatch repair
paj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:paj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PAJ_0835 (holB)
   03430 Mismatch repair
    PAJ_0835 (holB)
   03440 Homologous recombination
    PAJ_0835 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paj03032]
    PAJ_0835 (holB)
   03400 DNA repair and recombination proteins [BR:paj03400]
    PAJ_0835 (holB)
Enzymes [BR:paj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PAJ_0835 (holB)
DNA replication proteins [BR:paj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PAJ_0835 (holB)
DNA repair and recombination proteins [BR:paj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PAJ_0835 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C HolB_lid Cytochrom_C Glyco_hyd_101C
Other DBs
NCBI-ProteinID: BAK10915
UniProt: A0A0H3KZ12
Position
990431..991420
AA seq 329 aa
MNWYPWLNQPYRQVIGQHQDGRAHHALLITSLDGMGDDALVWGISRWLMCLQRDGLKSCG
HCHGCQLMQANTHPDWYRLEAEKGKTTLGIDAVRQVTEKMYHYAQQGGAKVVWLPDAAQL
SEAAANALLKTLEEPPANSWFFLSCREPSRLLATLRSRCMVLTLPPPDENHSLAWLRKQG
QHDEAPLLAALRLSAGAPGAALTLLDDGLWQARQKLCDSLPGALQQDILQLLPVLNADNS
AARIGWLLSFILDAMKWQQGATQWLTNVDRQDVVAMLAQHFSQTALNNSAQDWMRCRESL
LQVAAVNRELLLTDRLLSWADNLKPRLPG
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaactggtatccctggctcaatcaaccttaccgccaggtgattggtcagcatcaggat
ggccgtgcccatcatgcgttgttgatcacctctcttgacggcatgggcgatgatgcgctg
gtgtgggggatcagccgctggctgatgtgcctgcaacgcgacggattaaaaagctgtggt
cactgccatggctgccagctgatgcaggcaaatacgcaccctgactggtaccggcttgaa
gccgaaaaaggcaaaacgacgctgggcattgatgccgtgcgtcaggttacggaaaaaatg
tatcactatgcgcagcagggcggtgccaaggtggtctggctgccagatgcggctcagctc
agcgaggcggcggctaacgccttactgaaaacgctggaagagccgccagccaacagttgg
ttctttttaagctgtcgcgagccctcccgcctgctggcaacgctgcgtagtcgctgcatg
gtgctgacgttacctccaccagatgaaaatcacagtctggcctggctaagaaagcagggg
caacatgatgaggccccgctactggccgcgctgcggctcagtgcaggtgcgcccggtgcg
gcgctgacgctgttggatgatggcctgtggcaggcccggcaaaaactgtgcgattccctg
ccgggtgcgttgcaacaggacattctgcaactcctgcccgtgctgaacgcagataacagc
gcggcacggattggctggctgttatcattcatactggatgcgatgaaatggcagcagggc
gcaacccagtggctgactaacgtcgatcgtcaggacgtggtcgccatgctggcgcagcac
ttctcgcaaacggcgctcaataacagcgctcaagactggatgcgctgccgtgaatcgtta
ttacaggttgcggcagtgaatcgtgaactcctcctgactgacagattactgagttgggca
gataacctgaagcccaggttacccggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system