KEGG   Candidatus Phytoplasma australiense: PA0535
Entry
PA0535            CDS       T00752                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pal  Candidatus Phytoplasma australiense
Pathway
pal03030  DNA replication
pal03430  Mismatch repair
pal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PA0535 (dnaE)
   03430 Mismatch repair
    PA0535 (dnaE)
   03440 Homologous recombination
    PA0535 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pal03032]
    PA0535 (dnaE)
   03400 DNA repair and recombination proteins [BR:pal03400]
    PA0535 (dnaE)
Enzymes [BR:pal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PA0535 (dnaE)
DNA replication proteins [BR:pal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PA0535 (dnaE)
DNA repair and recombination proteins [BR:pal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PA0535 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DUF655
Other DBs
NCBI-ProteinID: CAM11869
UniProt: B1VA96
Position
complement(532172..534928)
AA seq 918 aa
MRGVFYLQSYYSLLDSLLPLEKLVLKAKENDYEFVALSDDYNLYGMPTFLQLCQKHDIKP
ILGLKINFLWKNQTGELLVYAKNDQGIKNLIQLATASKKEAQSHLHLEQIEALGKDLFII
ICGLCPFWEKIFVNDQKNEFQEVLEKLKTIFSEIFLGISFQSFFLEKLSDNLIDFSTHFE
IPCLPVNKTNYDDAKAQETYQILAKMKNKTIYSEIDLSFLTKSEFDIRYQKYPQIMDSLK
QLIPKINYQTPLKKNFSLPSYLDFIEKKEKDLPKEVVFEKPEKKLFQNLDAKKYLKKIVY
QGLEKFLNPSKSKYEKYSQRINEELKIINDLNYENYFLIVSDLVKYAKKNNILVGPGRGS
SSGSLVCFCLEITEIDPLKYNLIFERFLNPQRKTMPDIDLDFPDNKREIVIQYIRQKYGL
HHVANIITFGSFAKKNAIIKELLKFKKLMPFQEKQLFHFLENQKPNQITDDLDDQIKNLL
QIASFLEGLPRFTGTHPAGIILSKDNLLQNIPLQKSNHLNLLQTQWEAKELETMGLLKID
LLGLHSLTIIEQIIAAIKESQKDFNLFSIPLNDPKTYQLLSNAKTLGVFQLESGNAKKIL
TRMAPNNFEDLVALLALNRPGPIDSFDLFLKNRNQFNSQKIYFDSLIDHILKPTHGVILY
QEQIMQIASLFAKYSLAEADLFRRAISKKDKTVLLKEKKYFLEKTQKEGHSLSLSNQIYD
YILKFANYGFNKSHSVAYSLISYRMAYLKTHYFIEFMTILLNDSLNDPLQTKALLKEAFQ
AGITLVKPNIFVSSDQYYFKNNQLFLPLSLIKGVNSNFCKELIQERHKKNFTLSFKEFKQ
RLFFCLNETILTNLILGGALDQMGLNRKTLFHNQALNEVKYYRFLPNYRIVEYEEFLSHE
LKERQKKVFGFNLDDYIK
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgagaggtgttttttatttacaaagctattattctttgttggacagtttattaccttta
gaaaaattagttttaaaagctaaagaaaatgattatgaattcgttgctttaagtgatgat
tacaatttatacggaatgccaacttttttgcaattgtgtcaaaaacacgatataaaacct
attttaggccttaaaattaattttttatggaaaaaccaaacaggtgaacttttggtttat
gccaaaaacgatcaaggaataaaaaatttaattcaattagcaactgcaagcaaaaaagaa
gctcaaagccatctccatctagaacaaatagaagctttaggaaaagatttatttattatc
atttgcggactttgtcctttttgggaaaaaatttttgtcaacgaccaaaaaaatgaattt
caagaagtattagaaaaattaaaaacaatcttttctgaaatttttttaggaatttctttt
caaagtttttttttagaaaaattatccgacaatcttatagattttagcactcattttgaa
ataccttgtttgcctgtcaacaaaacgaattatgatgatgcaaaagcccaagaaacttat
caaattttggctaaaatgaaaaacaaaacaatttattctgaaatagatttatctttttta
actaaaagtgagtttgatattagatatcaaaaatatccacaaatcatggattctttaaaa
caattaattcctaaaattaattatcaaactcctttgaaaaaaaatttttctttaccttct
tacctagattttattgaaaaaaaagaaaaagatttacctaaagaagttgttttcgaaaaa
ccggaaaaaaaactttttcaaaacttggatgcaaaaaaatatttaaaaaaaatagtttat
caaggattagaaaaatttttaaatccttcaaaatcaaaatatgaaaaatactcccaaaga
attaacgaagaattaaaaatcattaatgatttgaattacgaaaattattttttaattgta
agtgatttagtcaagtacgctaaaaaaaacaatattttagtaggtcctggaagaggttct
tcttctggttctttggtttgtttttgtttagaaattacagaaattgaccctttaaaatat
aatcttatttttgaaaggtttttgaatcctcaaagaaaaacaatgccagatattgacctt
gatttccctgataataaaagagaaatagtaattcagtatattcgtcaaaaatacggttta
catcacgtggcaaatattattacttttggaagttttgccaaaaaaaatgccatcattaaa
gaattattgaaatttaaaaaattaatgccttttcaagaaaaacaactttttcatttttta
gaaaaccaaaaaccaaaccaaataactgatgatttagatgaccaaatcaagaatttgtta
caaatagcatcatttttagaaggcctacctcgttttacaggaacccatcctgcagggatt
attttaagcaaagataacttattacaaaatattcctttacaaaaatcaaatcacctaaat
ttattgcaaactcaatgggaagcaaaagaattagaaacaatgggtttgttaaaaatagat
ttattaggccttcatagtcttactatcatagaacaaataattgcagcaattaaagaaagt
caaaaagattttaatttattttctattcctttaaatgaccccaaaacttatcaacttttg
tcaaacgcaaaaacattgggagtttttcaattggaatctggcaacgccaaaaagatttta
acccgcatggctcctaacaattttgaagatttagttgccttattagctttgaatcgccca
ggtcccatcgattcttttgatttgtttttaaaaaatcgcaaccaattcaattcccaaaaa
atttattttgattcgttgattgatcatattttaaaaccaactcatggagtcatcctttat
caagaacaaattatgcaaatagcttccctttttgccaaatatagcctagctgaagcagac
ctttttcgaagagcaatcagcaaaaaagataaaactgtcttattaaaagaaaaaaaatat
tttcttgaaaaaactcaaaaagaaggtcacagtctttctttatctaatcaaatttatgat
tatattttaaaatttgctaattatggttttaataaaagtcatagtgttgcttattctttg
attagttatcgtatggcttatttaaaaactcactattttattgaatttatgacaatttta
ttaaatgattctcttaatgatcctttgcaaactaaggctttattgaaggaagcctttcaa
gcaggaattaccttagtcaaaccaaatatttttgttagctctgatcaatattatttcaaa
aataatcaattatttttacctttaagcttaattaaaggagtgaatagtaatttttgtaaa
gaattaatccaagagcgtcataaaaaaaatttcactttatcttttaaagaatttaaacaa
aggttatttttttgtttaaacgaaactattctcactaatttaattttaggtggtgcactt
gatcaaatgggtttgaatcgaaaaactttatttcacaatcaagctttaaatgaagttaaa
tattatcgttttttaccaaattatcgcattgttgaatatgaagaatttttatcacatgaa
ttaaaagaaagacaaaaaaaggtttttggttttaaccttgatgattacataaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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