KEGG   Paenibacillus albus: EJC50_00860
Entry
EJC50_00860       CDS       T06567                                 
Symbol
sigW
Name
(GenBank) RNA polymerase sigma factor SigW
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
palb  Paenibacillus albus
Brite
KEGG Orthology (KO) [BR:palb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:palb03021]
    EJC50_00860 (sigW)
Transcription machinery [BR:palb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EJC50_00860 (sigW)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_16 HTH_23 UPF0122 HTH_WhiA HTH_AsnC-type HTH_20 DUF4908 Rv2175c_wHTH
Other DBs
NCBI-ProteinID: AZN38388
UniProt: A0A3S8ZY68
Position
complement(194280..194849)
AA seq 189 aa
MLKSVEARLARLALKGDQRAFAELVEMYQDKLYHMAYRMLYNRQEAEDVVQEVFLRVYKN
LERYDDTMKFSTWIYRIATNLCIDRLRKRKAVYSLDAESSEHEGLDGYAMIPSDNRTPES
ELLLSDTQRIIHQAIETLPAKYKSVMVLRYLEELSLQEIGDVLGMPVTTVKTRVHRGREF
LRKKLEHKL
NT seq 570 nt   +upstreamnt  +downstreamnt
gtgttgaaatcagttgaggcgaggttagcaagattagctttgaaaggcgatcagcgggct
tttgccgagcttgttgagatgtatcaggacaagctttatcatatggcttaccgaatgcta
tataaccggcaggaagcggaggacgttgttcaggaagtgttcctgcgggtatacaagaac
ttggagcgctacgacgacacgatgaagttctccacctggatctaccggatagcaacgaat
ctgtgtatcgatcggctgcgcaagcgcaaagcggtctattcgctggatgcggaatcgtcg
gagcatgaagggctcgatggctacgcaatgattccaagcgataaccggacaccggagagc
gagctgctgctatcagatacgcagcggatcattcatcaagcgattgagacattgccagcg
aagtataagtccgttatggtgctgcggtatttagaggagctgtcgctgcaagaaattggc
gatgtgctggggatgccggtaacgacagtgaagacgcgtgtgcaccggggacgggagttc
ctgcgcaagaagctcgagcataaactgtag

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