KEGG   Paenibacillus albus: EJC50_05120
Entry
EJC50_05120       CDS       T06567                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
palb  Paenibacillus albus
Pathway
palb03030  DNA replication
palb03430  Mismatch repair
palb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:palb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EJC50_05120 (dnaX)
   03430 Mismatch repair
    EJC50_05120 (dnaX)
   03440 Homologous recombination
    EJC50_05120 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:palb03032]
    EJC50_05120 (dnaX)
   03400 DNA repair and recombination proteins [BR:palb03400]
    EJC50_05120 (dnaX)
Enzymes [BR:palb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EJC50_05120 (dnaX)
DNA replication proteins [BR:palb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EJC50_05120 (dnaX)
DNA repair and recombination proteins [BR:palb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EJC50_05120 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 DnaX_C AAA_30 RuvB_N TIP49 AAA_5 AAA_19 AAA_22 ResIII AAA_16 AAA_assoc_2 AAA_14 PIF1 AAA_24 Rad17 AAA_2 TsaE Mg_chelatase PTPlike_phytase AAA_18 TniB T2SSE RNA_helicase HalX Trimer_CC
Other DBs
NCBI-ProteinID: AZN39118
UniProt: A0A3Q8X2R6
Position
1091606..1093408
AA seq 600 aa
MSHIALYRAWRPQTFQDMVGQQHIIQTLQNAIREQRVSHAYLFNGPRGTGKTTAAKVMAK
AINCERGPTPEPCNVCDACRGITAGTIMDVVEIDAASNRGIDEIRDIRDKVRYAPSEVRY
KVYIIDEVHMLTTEAFNALLKTLEEPPAHVIFILATTEPHKLPATIISRCQRFDFRQVSM
PEQTERLRQICNEEGIQADDDALAYIARLSDGGMRDAIGLLEQVSAYGGERITLGDAIDV
TGGLATEQFKQLADAIRDRDAAAVMPLVEGLMQAGKSADKCLENLIFYFRDLLVLKLAPN
GKVSTERIVDQAKYREMADSFSSELLFRMIDELNQYQLEIRHAALPQTIFEIALMKICTM
QDTGGGAATSAGATSGSDSAGGSGGASSGEVQRLQQRIDTLERKIEQLLQSGVRPDGQGA
PSGDQAGGGARGNRNSGFGNKSGAPGGGGSPSIARVKLDPFLAAAESQATGQVRMKWSDI
LQRVKGNNISTHAWFVNGDPVSAADNTVLVAFKNSIHRETTEKPANREVIERVLNEVFGR
PVRLATVMLKEWQTAAEKGPAPAGELLFEQEEDGSAPKEPEWVEEAVKMFGEDLVVIEDK
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgtcacatatcgctttataccgtgcttggcgtccgcagacgttccaggatatggtcggc
cagcagcatattattcaaacgttacagaatgcgattcgcgagcagcgggtttcacatgcg
tatttatttaatggtccaagaggcacgggcaagacgactgcagccaaagttatggccaaa
gccatcaactgcgaacgtggtccgacgccggagccctgcaacgtctgcgatgcatgccgg
ggcataactgccggtacgatcatggatgttgtagagattgatgctgcatccaatcgcggc
attgacgaaattcgtgatatacgcgacaaggtgcgttacgctccatctgaggtacgctat
aaagtgtacatcattgatgaagtgcacatgctgactaccgaggcgttcaatgcgctcttg
aagacgctcgaagagccgccggctcacgtcatctttatattggcgacgacagagccgcac
aagctgccggcgacgatcatctctcgctgtcagcgatttgacttcaggcaagtttccatg
ccggagcaaaccgagcggctgcgccagatttgcaacgaagaaggcattcaagcggatgac
gatgcgcttgcttatatagctagattgtccgacggcgggatgcgagatgcaatcggcctg
ctcgagcaagtttctgcatatggtggagagcgaataacgcttggcgatgctattgatgtt
acgggcggtcttgcgacggagcagttcaagcagctcgccgatgccataagggatcgggat
gcggcggcggtgatgccccttgttgaagggcttatgcaagcgggcaagagtgctgacaaa
tgtctcgagaacttgatcttctacttccgtgatttgcttgtgctcaagcttgctccgaac
ggcaaagtatcgacggagcgaatcgttgaccaggcgaagtaccgcgagatggcggattcc
tttagcagcgagctgctcttccggatgattgatgagcttaaccagtatcagctggagatc
cggcacgctgcactgccgcagacgatattcgagatcgcgctcatgaagatttgcacgatg
caggatacgggcggaggagcagccacatccgcaggggctacatcgggatcggattctgct
ggaggcagcggcggcgcatcatccggtgaggtgcagcgtcttcagcagcgcatcgatacg
ctcgagcgcaagatcgaacagctattgcaatccggcgttcgtccggatgggcagggcgct
ccttctggcgatcaagcgggaggcggtgcacgaggcaatcgcaactccggcttcggcaac
aagagcggcgctccgggaggtggcggttctcctagcattgcacgcgtgaagctggatcca
ttcttagctgcagccgagagccaggcgacggggcaggtgcggatgaagtggagtgacatt
ttgcagcgggtgaaagggaataatatttccactcatgcctggttcgtgaacggagatccg
gtcagtgcggcggacaatacggtcttggtcgcattcaagaactccatccaccgcgagacc
acggagaagccggctaaccgcgaggtcatcgaacgggtgcttaatgaagtgtttggccga
ccggttcgattggcaaccgtcatgctgaaggaatggcagacggcagcggagaaaggtccg
gcgccggcgggtgagctgttattcgagcaagaagaggacggcagcgcaccgaaggagccg
gaatgggttgaagaagctgtgaagatgttcggcgaagatcttgttgttattgaagacaaa
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (39)   

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