KEGG   Paenibacillus albus: EJC50_11855
Entry
EJC50_11855       CDS       T06567                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
palb  Paenibacillus albus
Pathway
palb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:palb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EJC50_11855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palb03019]
    EJC50_11855
   03009 Ribosome biogenesis [BR:palb03009]
    EJC50_11855
Messenger RNA biogenesis [BR:palb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EJC50_11855
Ribosome biogenesis [BR:palb03009]
 Prokaryotic type
  rRNA helicases
   EJC50_11855
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CA109-like CMS1 DUF4240 AAA_22
Other DBs
NCBI-ProteinID: AZN43668
UniProt: A0A3Q8XBC9
Position
2640961..2642541
AA seq 526 aa
MKTFAEFGLEPKVLQAITDLGFEESTPIQSKSIPIALNGTDMIGQAQTGTGKTAAFGIPL
VNKIPVTEDRIVALIMTPTRELAIQVSEEIGKLTRYKGLRSLPIYGGQEIGRQIRALKKR
PQIIIGTPGRLLDHINRKTIRLDDVQTVILDEADEMLDMGFMEDITSILSLVPENRQTML
FSATMPTNIRKLADQFLKNPEHVSVIPTQVSAPTIDQAYIEVHERQKFDALSRLLDMESP
ELAIIFGRTKRRVDELSEALQKRGYSADGLHGDLSQNQRDNVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGVAWSFVTPRELDHMHFIEKVTR
HKIAKKPLPSLAEAIEGKQRLTAERILDALDSEGVNEFKAIAIQLLEQYDSVNLLAAAIK
LITGEKKDVSIELTPEDPIRAKKRRPDVRSNGRRFSGGPFGGGSRSGSGPRGRGESSGGR
GGYGGNRSSSGSSSSSSYGRDRDGGSKGRSSEGRSETRRPRPTSAE
NT seq 1581 nt   +upstreamnt  +downstreamnt
ttgaaaacatttgctgaattcggcttggaacctaaggttcttcaagccattactgacctt
ggatttgaggaatcaaccccaatccaatcgaaatccattccaattgcgcttaacggtacc
gatatgatcggccaagcacaaacaggaacgggtaagacggctgccttcggtataccgctt
gttaacaagattccggttactgaagatcgtatcgtcgcattaattatgaccccgacccgt
gagcttgcgatccaagtttcggaagaaatcggaaagcttacacgttacaaaggtttgcgt
tcgcttccaatttatggcggacaagagatcggacgtcagatccgcgcattgaagaagcgt
ccccaaatcatcatcggtacacctggtcgtttgcttgaccatatcaaccgcaagacgatc
agacttgatgatgtacaaactgttattcttgatgaggcggatgaaatgctcgacatgggc
ttcatggaagacattacttccatcttgtccctcgtaccagagaatcgccaaacgatgttg
ttctcggctacaatgcctacaaacattcgtaaactggcagaccagttcctgaaaaaccct
gagcacgtatcggttatcccgacacaagttagtgctccgacaattgatcaagcttatatc
gaagtgcatgagcgccagaagtttgatgcgcttagccgcttgcttgatatggaatcgcct
gagcttgctatcattttcggtcgtacgaagcgccgcgtagatgagctgagcgaagcattg
cagaagcgcggatattccgctgacggcttgcatggcgacttgtcccaaaatcagcgtgac
aacgtgatgcgtaaattccgcgacggcagcatcgatgtccttgtagcgacagacgttgca
gcacgcggtctagacgtatcgggtgtaacgcatgttattaactttgacttgccgcaagat
ccggagagctatgtacaccgtatcggccgtactggccgtgcaggtaaagaaggtgtcgct
tggtcgttcgtaacgccacgcgagctggatcatatgcacttcatcgagaaagtaacacgc
cacaagattgcgaagaagccattgccaagccttgcagaagcaatcgaaggcaaacaacgc
cttactgctgagcggatccttgatgcgcttgattcggaaggcgttaatgagttcaaggca
attgcaatccaattgcttgagcaatacgattccgtaaatctgctggcagcagcgattaaa
ttgatcactggcgagaagaaagatgtgagcatcgagcttacgccggaagatccaattcgt
gcgaagaaacgcagaccggatgttcgttcgaacggacgccgtttctccggcggtccattc
ggcggcggcagccgttccggcagtggtccacgcggacgcggtgagagtagtggcggacgc
ggcggctacggcggtaatcgcagtagcagtggcagcagcagtagcagcagctacggccgt
gaccgtgatggtggaagcaaaggtcgcagcagcgaaggccgcagcgaaacgcgtcgtcca
cgtccaacctctgctgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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