KEGG   Pseudomonas alcaligenes: A0T30_01860
Entry
A0T30_01860       CDS       T04318                                 
Name
(GenBank) type VI secretion protein
  KO
K11893  type VI secretion system protein ImpJ
Organism
palc  Pseudomonas alcaligenes
Pathway
palc02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:palc00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    A0T30_01860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palc02044]
    A0T30_01860
Secretion system [BR:palc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   A0T30_01860
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: AMR65172
Position
399360..400691
AA seq 443 aa
MEMLKVVWQEGMLLRPQHFQQNDRYFEHQLKSRSRLQDIYPWGFFSLEIDRQFLGMGKLV
LSQASGVLPDGSLFELDASRDPLALDVPPNTAATPVYLALPLVTGNHIESRRAEQQDVLA
RYRAHELEVADSNAGDVTVSQVSCGRPDFRLLLGEQQNDQAFVKLKVAEIFDTSPDGVIS
LDPEFSPTFLHTQASSYLLSCLKEVISLLGHRGDILAERVRAAGKLGNTEVGDFLMLQLV
NRYEPQLRHYLSLEQMHPELLYRELVGLLGELATFAADHKRPRLDSRYLHNDQAGSFRKL
MEALRQVLSMVLEQHAIELPLQQRQYGIQVSPLQDHALLGSATFVLAADAQCESEELRKR
LPAHLKIGAVERIRQLVNLHLPGIKVKPLPVAPRQIPFHAGKTYFALEFSAEELAQLESS
GGFAFHVSGDFAGLELKFWAIRS
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggaaatgctcaaggttgtctggcaggaagggatgctcctgcgcccgcagcacttccag
cagaacgatcgctatttcgagcaccagctcaagtcacgctcgcgcctgcaggacatctat
ccctggggcttcttcagcctggagatcgaccgccagttcctcggcatgggcaagctggtg
ctcagccaggccagcggcgtgctgcccgatggcagcctgttcgagctggatgccagccgc
gacccgctggccctggacgtgccgccgaataccgcggccaccccggtgtacctggccctg
ccgctggtcaccggcaaccatatcgagagccgccgcgccgagcagcaggacgtgctggcg
cgctaccgcgcgcacgagctggaggtggccgactccaacgccggcgacgtcaccgtcagc
caggtcagctgcggccgcccggacttccgcctgctgctcggcgagcagcagaacgaccag
gccttcgtgaagctcaaggtggcagaaatcttcgacaccagcccggacggggtgatcagc
ctcgacccggaattcagcccgaccttcctgcacacccaggcgtcgagctacctgctgtcc
tgcctcaaggaagtgatcagcctgctcggccaccgcggcgacatcctcgccgagcgcgtg
cgcgccgccggcaagctgggcaataccgaggtcggcgatttcctcatgctgcagctggtc
aaccgctacgagccgcagctgcgccactacctcagcctggagcagatgcacccggagctg
ctgtaccgcgagctggtcggcctgctcggcgagctggccaccttcgccgccgaccacaag
cgtccgcgcctggacagccgctacctgcacaacgaccaggccggcagcttccgcaagctg
atggaggcgctgcgccaggtgctgtccatggtgctggaacagcacgccatcgagctgccg
ctgcagcagcgccagtacggcatccaggtgtcgccgctgcaggaccacgcactgctcggc
agcgccaccttcgtgctcgccgccgatgcccagtgcgagtccgaagagctgcgcaaacgc
ctgccggcgcacctgaagatcggcgcggtggagcgcatccgccagctggtcaacctgcac
ctgccggggatcaaggtcaaaccgctgccggtggcgccgcgacagatcccgttccacgcc
ggcaagacctacttcgccctggagttcagcgccgaggaactggcgcagctggagagctcc
ggtggctttgccttccacgtgtccggcgacttcgccgggcttgagctgaaattctgggcg
atcaggagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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