KEGG   Pteropus alecto (black flying fox): 102888877
Entry
102888877         CDS       T02993                                 
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
  KO
K08525  retinoid X receptor beta
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale03320  PPAR signaling pathway
pale04659  Th17 cell differentiation
pale04919  Thyroid hormone signaling pathway
pale04920  Adipocytokine signaling pathway
pale04928  Parathyroid hormone synthesis, secretion and action
pale05200  Pathways in cancer
pale05202  Transcriptional misregulation in cancer
pale05207  Chemical carcinogenesis - receptor activation
pale05216  Thyroid cancer
pale05222  Small cell lung cancer
pale05223  Non-small cell lung cancer
pale05226  Gastric cancer
pale05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pale00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    102888877 (RXRB)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    102888877 (RXRB)
   03320 PPAR signaling pathway
    102888877 (RXRB)
   04919 Thyroid hormone signaling pathway
    102888877 (RXRB)
   04928 Parathyroid hormone synthesis, secretion and action
    102888877 (RXRB)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102888877 (RXRB)
   05202 Transcriptional misregulation in cancer
    102888877 (RXRB)
   05207 Chemical carcinogenesis - receptor activation
    102888877 (RXRB)
  09162 Cancer: specific types
   05226 Gastric cancer
    102888877 (RXRB)
   05216 Thyroid cancer
    102888877 (RXRB)
   05222 Small cell lung cancer
    102888877 (RXRB)
   05223 Non-small cell lung cancer
    102888877 (RXRB)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    102888877 (RXRB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pale03000]
    102888877 (RXRB)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pale03310]
    102888877 (RXRB)
Transcription factors [BR:pale03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    102888877 (RXRB)
Nuclear receptors [BR:pale03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   102888877 (RXRB)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 102888877
NCBI-ProteinID: XP_006907450
Position
Unknown
AA seq 535 aa
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAATAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSGSPDSSSPNPLPQGAPPHSPGPPLPPSAAPSLGGSGAPPPP
PMPPPPLSSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPP
VLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCR
DNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVD
RILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSS
LPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLS
RVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQK
YPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgtcctgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcagcaacggcggcggcggcggcagccggagaacaacaaaccccg
gagccggagccaggggaggctggacgggacgggatgggagacagcgggcgggattccgga
agcccagacagttcctccccaaatccccttccccagggtgctcctccccattctcctggg
ccacccctacccccttcagcagccccatcccttggaggctctggggcgccacccccaccc
ccaatgccaccacccccactgagctcccccttcccagttatcagctcttccatggggtcc
cctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccccagatt
aactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagccacca
gtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggcaaa
cggctatgtgcaatctgcggggaccgaagctcaggcaaacactatggagtttacagttgt
gagggctgcaaaggctttttcaagcgcaccattcgtaaggacctgacctactcatgccgg
gacaacaaagactgcacggtggataagcgtcagcggaaccgctgtcagtactgccgctat
cagaagtgcctggctactggtatgaagagggaagcggtacaggaggagcgtcagcggggg
aaagacaaggatggggatggggagggggccgggggagcccccgaggagatgcctgtggac
aggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgagggtcct
gggggaaccgggggtagcggcagcagcccaaatgaccctgtgactaacatctgtcaggca
gctgacaaacagctattcacacttgttgagtgggcgaagaggatcccacacttttcttcc
ttgcctctggatgaccaggtcatattgctacgggcaggctggaatgagctcctcattgcc
tccttctcccaccgatccattgatgtacgagatggcatcctccttgccacaggtcttcac
gtgcaccgcaactcagctcattctgcaggcgtgggagccatctttgatcggtccctctcc
agggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagctt
ggctgcctgagggcaatcattctgttcaatccagatgccaagggtctttccaatcccagt
gaggtagaggtccttcgggagaaagtgtatgcatcactggaaacctattgcaaacagaag
taccctgagcagcagggacggtttgccaagctgctgctacgtcttcctgccctcaggtcc
attggccttaaatgtctagagcatctgtttttcttcaagctcattggtgacacccccatt
gacaccttcctcatggagatgctcgaggcaccccaccagctggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (13)   
   KEGG PATHWAY (13)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (3)   
   Pfam (3)   
All databases (67)   

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