KEGG   Pteropus alecto (black flying fox): 102893757
Entry
102893757         CDS       T02993                                 
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1 isoform X3
  KO
K13126  polyadenylate-binding protein
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale03015  mRNA surveillance pathway
pale03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pale00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102893757 (PABPC1)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102893757 (PABPC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pale03019]
    102893757 (PABPC1)
   03041 Spliceosome [BR:pale03041]
    102893757 (PABPC1)
Messenger RNA biogenesis [BR:pale03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     102893757 (PABPC1)
   mRNA cycle factors
    Stress granule specific factors
     102893757 (PABPC1)
Spliceosome [BR:pale03041]
 Complex C
  Other components
   Complex C specific factors
    102893757 (PABPC1)
SSDB
Motif
Pfam: RRM_1 PABP RRM_7 RRM_5 RRM_occluded RRM_3 YflT
Other DBs
NCBI-GeneID: 102893757
NCBI-ProteinID: XP_006916707
UniProt: L5KAR8
Position
Unknown
AA seq 636 aa
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQ
RVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPNLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgaaccccagcgcccccagctaccccatggcctcgctctacgtgggggacctacacccc
gatgtgaccgaggcgatgctctacgagaagttcagcccggccgggcccatcctgtccatc
cgggtctgcagggacatgatcacccgccgctccttgggctacgcgtatgtgaacttccag
cagccagcggacgcggagcgtgctttggacaccatgaattttgatgttataaagggcaag
ccagtacgcatcatgtggtctcagcgtgatccatcacttcgcaaaagtggagtgggcaac
atattcattaaaaatttggacaaatccattgataataaagcactgtatgatacattttct
gcttttggtaacatcctttcatgtaaggtggtttgtgatgaaaatggttccaagggttat
ggatttgtacattttgagacacaggaagcagctgaaagagctattgaaaaaatgaatggg
atgcttctaaatgatcgcaaagtatttgttggacggtttaagtctcgtaaagaacgagaa
gcagaacttggagctagggcaaaagaattcaccaacgtttacatcaagaattttggagaa
gacatggatgatgagcgccttaaggatctctttggcaagtttggacctgccttaagtgtg
aaagtaatgactgatgaaagtggaaaatccaaaggttttggatttgtaagcttcgaaaga
catgaagatgcacagaaagccgtggatgagatgaatggaaaggagctcaatggaaaacaa
atttacgttggtcgagctcagaaaaaagtggaacggcagacagaacttaagcgcaaattt
gaacagatgaagcaagataggatcaccagataccagggtgttaacctttatgtgaaaaat
cttgatgatggtattgatgatgaacgtctccggaaagagttttctccatttggtacaatc
actagtgcaaaggttatgatggagggtggtcgcagcaaagggtttggttttgtatgtttc
tcctccccagaagaagccactaaagcagttacagaaatgaatggtagaatcgtggccacc
aagccattgtatgtagctttagctcagcgcaaagaagagcgccaggctcacctcactaac
caatatatgcagagaatggcaagcgtgagagctgtgcccaaccccgtaatcaacccctac
cagccagcacctccttcaggttacttcatggcagctatcccacagactcagaaccgtgct
gcatactatcctcctagccaaattgctcaactaagaccaagtcctcgctggactgctcag
ggtgccagacctcatccattccaaaatatgcccggtgctatccgcccagccgctcctaga
ccaccatttagtactatgagaccagcttcttcacaggttccacgagtcatgtcaacgcag
cgtgttgctaacacatcaacacagacaatgggtccacgtcctgcagctgctgccgctgca
gctactcctgctgtccgcaccgttccacagtataaatatgctgcgggagttcgcaatcct
caacaacatcttaatgctcagccacaagttaccatgcagcagcctgctgttcatgtacaa
ggtcaggagcccttgactgcttccatgttggcatctgcccctcctcaagagcaaaagcaa
atgttgggtgaacggctgtttcctctaattcaagccatgcaccctaatcttgctggtaaa
atcactggcatgttgttggagattgataattcagaacttcttcatatgcttgagtctcca
gagtctctccgttctaaagttgatgaagctgtagctgtgctacaagcccaccaagctaag
gaggctgcccagaaagcagttaacagtgccactggtgttccaactgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (62)   

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