KEGG   Pteropus alecto (black flying fox): 102898513
Entry
102898513         CDS       T02993                                 
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:pale00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102898513 (COL13A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pale00536]
    102898513 (COL13A1)
Glycosaminoglycan binding proteins [BR:pale00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102898513 (COL13A1)
SSDB
Motif
Pfam: Collagen Gag_p30
Other DBs
NCBI-GeneID: 102898513
NCBI-ProteinID: XP_015447666
Position
Unknown
AA seq 818 aa
MDIPVPLEASINFQDGNLGFPVPLLLSQRDSDFSKIGPGSCGLLALALCSLALSLLAHFR
TAELQARVLRLEAERGEQQMEPAILGQVNQLLDEKWKLHSRRRREALKMSPGCHCPPGPP
GPTGRPGLPGDKGAIGMPGRVGVKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFPG
PIGLDGKPGHPGPKGEMGLTGPRGQPGPQGQKGEKGQCGEYPHREHLSSTLAALRSNQII
TLKLLPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGPPGLPGPMGP
PGFPGPPGPKGDPGIQGYHGRKGERGMPGMPGKQGAKGAPGIAVAGMKGEPGTPGTKGDK
GAAGSPGLLGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGQQG
DKGEPGTTGEQGPAGPKGSKGEPGKGEMVDYNANINEALQEIRTLALIGPPGLPGQIGPP
GAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKPGPAGIKGEDGHPGSL
GEKGEKGESGQAGPPGLDGPTGEKGEPGGQGRPGATGLPGPIGLPGFTGEKGEPGEKGDP
GVEVPGLPGPEGPPGTPGLQGIPGPKGEAGQDGAKGEKGVQGEKGDRGPLGLPGASGLDG
RPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKG
SRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNKMPLREARGPFEIGEDGTLQQGHPVL
YYQPFSTTDLLNWKQHTPPYSEKPQAMIDLLESIFQTH
NT seq 2457 nt   +upstreamnt  +downstreamnt
atggacatcccagtccctctggaagcgtctataaatttccaggatggaaacctgggcttc
cctgtgcccctactcctatcacaaagagattctgacttcagcaagatcggccccgggtct
tgcgggctgctggcactggctctctgctcgctggctctcagcctgctcgcccactttcgg
accgccgagctgcaggcccgggtgctgcgcctggaagcggagcgtggagagcagcaaatg
gagccggctattttgggacaagtcaaccaactgctggatgagaaatggaagctccactct
cgcagacgccgggaagccctgaagatgtccccagggtgtcactgccctccagggcctcca
ggtcccactggaagacctggcctcccaggggacaaaggcgccattgggatgcctggacgt
gtgggagtaaagggccaaccaggcgagaagggggccccaggagatgccgggatgtccatc
atcggtccccgaggtccccctggtcagccgggcactcgaggttttcctggatttccgggt
cccattgggctagatggcaaaccgggccaccccggaccaaaaggggaaatgggcctgaca
ggtccccgaggacagccgggacctcaaggacaaaaaggagaaaagggtcagtgtggagag
tacccacaccgggagcacctaagcagcactctagcagctctgcgctccaaccagataatt
accctaaagctgctgcctctcctcaattcagtgcgactggctccacccccagtcataaaa
aggcgaaccttccagggtgaacagggccaggccggcatccagggcccaccggggccacca
ggtccccctggaccgagtggacctctggggcccccaggacttccagggcccatggggcca
cccggctttcctgggcctcctggaccaaagggagacccggggatccagggctaccatggc
cggaagggagaacggggcatgccagggatgccgggcaaacagggagcgaagggggctcct
ggaatcgccgtggctgggatgaagggtgagccggggaccccaggaaccaagggggataag
ggggctgcaggctcccctgggctactcggcctcctggggcagaagggagagaaaggagat
gctggcaactccattggaggaggcagaggggagcccggtccaccagggctcccagggccc
ccggggccaaagggagaagctggtgttgatggccaggccggccccccaggacagcaggga
gacaagggagagcctggaacaactggagaacagggaccagctggccccaagggctccaag
ggagaaccagggaaaggagagatggtggattacaatgcaaacatcaacgaggctctccag
gagatccggacgctggccttgatcggtccccctggtcttcccgggcaaatcggcccacct
ggagctccagggatcccaggccagaagggggagattggactgccaggccctccaggacac
gatggggaaaagggacctcgaggcaaaccaggagacatgggccctcctggccctcaaggc
cccccaggaaagcctgggcctgcgggaataaagggagaagacggacacccagggagcctg
ggagaaaagggagagaaaggggagtcgggacaggcgggcccaccgggtctagatggccca
actggggagaaaggagaaccaggtggccaagggagacccggagcaacaggattgcctggc
ccaatcgggctcccgggatttacaggagaaaaaggagaacccggggagaagggtgaccca
ggagtagaggttcctgggctgccagggccagaggggcctcctggaactccgggcctccaa
ggtattcctggaccaaagggggaagcaggacaagatggagcaaaaggagagaagggtgtc
caaggagaaaaaggagaccgaggtcctttgggattacccggagcttcaggtttggacggc
aggcctgggccaccgggtactccaggaccaattggagttccaggccctgcgggaccaaag
ggcgagaggggcagcaaaggtgaccctgggatgacaggaccaacgggagcagctgggctt
cctggtttgcatggaccacccggggacaaaggaaaccggggggagagggggaagaaaggc
tctagagggcctaaaggggataagggagaccaaggagcgcctggattagatgccccctgt
ccattgggcgaagacggcttaccagtccagggctgctggaacaagatgcccctccgagag
gcacgaggtccctttgagattggagaggatggcacactccagcaaggccaccctgtcctc
tactatcagccattcagcacaaccgacctcctcaactggaagcagcacaccccaccctat
tcggagaaaccccaggcgatgattgacctgctcgagtccatcttccaaactcattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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