KEGG   Parasphingopyxis algicola: HFP57_10955
Entry
HFP57_10955       CDS       T06669                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
palg  Parasphingopyxis algicola
Brite
KEGG Orthology (KO) [BR:palg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:palg03021]
    HFP57_10955
Transcription machinery [BR:palg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HFP57_10955
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 SnoaL_2 HTH_38
Other DBs
NCBI-ProteinID: QLC25486
Position
complement(2219316..2220203)
AA seq 295 aa
MTEVAEPTREFERHRAHLFGIAYRMLGSVAEAEDMVQDCWLRWTTADRAAVAAPRAFLAR
TITRLCIDHRKSARVQRESYTGPWLPEPVAEGLSPDIEMENAETLTVALMLALERLSPLE
RAAYLLHDIFDMGFSEIARALGRSEQGCRQLAARARRHVRDAKPRFAVADEDGDRLVSAF
VAASRDGDIASLTALLTETVSAHTDGGGARIAAINVIQGRDKVVRFVTGLRRKRGWRPPE
ILWRGAINGLPGMISRDAHGVLQSDAFAIADGRIKAIYTVRNPAKLAHIAARLDR
NT seq 888 nt   +upstreamnt  +downstreamnt
atgaccgaagtcgccgaaccgacgcgggagttcgagcggcaccgggcccatctgttcggt
atcgcctatcgtatgttgggctcggtcgctgaagccgaggatatggtccaggattgctgg
ctcagatggacgacggccgaccgggctgccgtcgccgcgcctcgcgcttttctcgcgcgg
acgattacccggctttgtatcgatcatcgcaaatcggcccgcgtccagcgcgaatcctat
accggcccgtggttgcccgagccggtggccgaagggttgagcccggatatcgagatggaa
aatgccgagacgctgacggtcgcgctgatgctggcgctcgaacggctctcgccgctcgag
cgtgcggcctatttgctgcacgacatattcgatatgggattttcagagatcgctcgggcg
ctgggcaggagcgagcagggctgccgccagctggccgctcgcgcccggcggcatgtccgc
gatgcaaagccgcgtttcgcggttgcggatgaggatggcgatcggctggtcagtgctttc
gtggccgccagccgggatggcgatatcgcgtcgctcaccgcgttgctgacggagacggta
tccgcccataccgatggcggcggcgcgaggatcgcggcgatcaacgtgattcagggtcgc
gacaaggtcgttcgtttcgtcaccggtttgcggcgcaagcgcggttggcgaccgccagag
atattatggcgcggcgcgatcaacgggctgcccggcatgatcagccgcgacgctcatgga
gtcttgcagtcggatgcctttgcgatcgccgatggccggatcaaggcgatctacacggtg
cgcaatccggcgaaactggcgcatatcgctgcgcgtctcgatcgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system