KEGG   Pantoea alhagi: B1H58_03175
Entry
B1H58_03175       CDS       T05014                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
palh  Pantoea alhagi
Brite
KEGG Orthology (KO) [BR:palh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:palh03016]
    B1H58_03175
Enzymes [BR:palh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     B1H58_03175
Transfer RNA biogenesis [BR:palh03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    B1H58_03175
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 Nucleoporin2
Other DBs
NCBI-ProteinID: ARJ41098
UniProt: A0A1W6B1Z8
Position
673032..673565
AA seq 177 aa
MSARRLFFGIGLPKPLQQQLVRWRAEQFPEEAGRPVVAASLHITLAFLGEISDEKAQGLQ
QLAGRIRQPPFTLQLDDAGHWPRPGVVWLGCRQAPRGLLQLAEMLRAQAARSGCYQSPQP
FHPHITLLRNATRPVALPSRNFHWQFTVDHFSLYQSVFAQGRTRYRALQSWPLQESV
NT seq 534 nt   +upstreamnt  +downstreamnt
atgagcgcacgtcgtctcttttttggcatcggattacccaaaccgttgcaacagcagctg
gttcgctggcgcgccgaacagttccccgaggaggcagggcgaccggtggtggccgccagc
ctgcatattacgctggcattccttggcgagatcagcgatgaaaaagcgcaggggctgcaa
cagctggctggtcgcattcggcagccgccttttaccctacagctggatgatgccgggcac
tggccgcgtcccggcgtggtctggctcggctgtcgtcaggcgccgcgcggcctgctgcag
ctggcggagatgctgcgcgctcaggcggcgcgcagcggctgttatcaaagcccacagccg
tttcatccgcatatcaccctgctgcgcaacgcgacgcgcccggttgccctgccgtcgcgt
aatttccactggcagtttacggtggatcatttttctttataccagtcggttttcgcccag
gggcgaacccgctatcgcgcgctacaaagttggccgctgcaggagtccgtatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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