KEGG   Psychrobacter alimentarius: A3K91_1732
Entry
A3K91_1732        CDS       T04320                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pali  Psychrobacter alimentarius
Brite
KEGG Orthology (KO) [BR:pali00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pali03032]
    A3K91_1732
   03400 DNA repair and recombination proteins [BR:pali03400]
    A3K91_1732
Enzymes [BR:pali01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     A3K91_1732
DNA replication proteins [BR:pali03032]
 Prokaryotic type
  DNA Topoisomerases
   A3K91_1732
DNA repair and recombination proteins [BR:pali03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      A3K91_1732
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AMT97330
UniProt: A0A144PJZ1
Position
complement(2138762..2139880)
AA seq 372 aa
MNKENQQNPTQDVRHDYEHLAQLANLRYVSDNEPGYGRRRWGRGFTYRDATGKTVKDKAL
RKRFDALVIPPMWSEVWICRDEKGHLQSTGRDEKARKQYLYHPEWDRVRDQAKFDAMIGF
AKALPNLRAQVEQDLEATPLSRANVLAAVVKLLETTLIRIGNSRYAKLNKSYGLSTLRSK
HVSQTDTGLAFDFVGKSAKEHHIELQDERLIEIIQACSELPGYQIFKYLDENGHKQIVDS
SDINEYLRTHTCTDGSSGKMYSAKDFRTWMASVLAASHLYDELQTSDGKAILTSVPDSAE
RQQLVTDMVKMVAEELGNTPAVCRSSYINPIIIERFLAGEFFESYKQARRGHTKKYQSCE
EKALLGFLSNET
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgaacaaagaaaatcagcaaaaccctacacaagatgtgcgccatgactatgagcatttg
gctcagttggcaaatttacgctatgtcagtgacaatgagcctggatatgggcgcagacgg
tggggacgcggttttacctatcgcgacgcaacaggaaaaacagtcaaagacaaagcgcta
cgtaaacgatttgatgcgttagtgattccgcctatgtggtcagaggtctggatatgccga
gatgaaaaaggccatctacaatccacaggccgcgacgaaaaagcacgtaaacaatatctg
tatcatcctgagtgggatcgcgtgcgcgaccaagccaagtttgatgccatgattggtttt
gcaaaggctttgccaaacctacgtgcccaagtcgaacaggatttggaggcaacaccatta
tcacgagccaatgtcttggcagccgtggtcaagctattagaaaccacgctcattcgtatc
ggtaatagtcgttatgctaagctcaataaaagctatggcttaagtacattaagaagcaag
cacgtcagtcaaactgacacaggtctggcgtttgattttgtcggtaaaagtgccaaggag
catcatattgagctacaagatgagcgtttgattgagatcatacaagcgtgctctgagcta
ccgggttatcagatctttaagtatttggatgaaaatggtcacaagcaaattgtcgatagt
agtgatatcaatgagtatctgcgaacacacacttgtaccgatggtagcagtggcaagatg
tatagcgcaaaagactttcgcacatggatggcaagtgtgcttgcagcgagtcatttgtat
gacgaattacaaacctctgacggtaaagccatattaaccagtgtgcctgacagcgccgag
cggcagcaattggtcactgatatggtaaaaatggtcgcagaagagctgggtaatacgcct
gctgtttgccgatcctcttacatcaaccctattattattgagcgatttttagcgggggag
ttttttgagtcctacaagcaagcacgccgtggacataccaaaaagtatcaaagctgtgaa
gaaaaggcgttgctaggttttctgagtaatgaaacctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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