KEGG   Pseudomonas alkylphenolica: PSAKL28_09240
Entry
PSAKL28_09240     CDS       T03238                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
palk  Pseudomonas alkylphenolica
Pathway
palk00470  D-Amino acid metabolism
palk00550  Peptidoglycan biosynthesis
palk01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:palk00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PSAKL28_09240
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PSAKL28_09240
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:palk01011]
    PSAKL28_09240
Enzymes [BR:palk01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     PSAKL28_09240
Peptidoglycan biosynthesis and degradation proteins [BR:palk01011]
 Precursor biosynthesis
  Amino acid ligase
   PSAKL28_09240
SSDB
Motif
Pfam: MurD-like_N Mur_ligase_M Mur_ligase_C TrkA_N
Other DBs
NCBI-ProteinID: AIL60155
UniProt: A0A077F7C3
Position
1011191..1012537
AA seq 448 aa
MSLIASDHFRIVVGLGKSGMSLVRFLASRGVAFAVADTREQPPELETLRRDYPQVEVRCG
ELDVEFLCRADELYVSPGLALATPALQQAAARGVKLSGDIELFARNAKAPIIAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTDQLNAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLLAENQPVWTFGLNTPD
FKAFGLREENGEKYLAFEFQNLMPVRELKIRGSHNQSNALAALALGHAVGLPMDAMLSSL
RTFAGLAHRCQWLRERDGVNWYDDSKATNVGAALAAIEGLGADIDGKLVLVAGGDGKGAD
FSALRAPVAAHCRAVVLLGRDAERLAQALGDSVPLVRVKSLEEAVQQCAELAQPGDAVLL
SPACASLDMFKNFEERGRLFAQAVGGLA
NT seq 1347 nt   +upstreamnt  +downstreamnt
gtgtcactgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgagccggggcgttgcctttgcggtcgccgacacccgtgaa
caaccaccggaactggaaaccctgcgccgcgattacccgcaggtggaagtgcgctgtggc
gagctggatgtagagtttctctgccgtgccgacgagctgtatgtcagccctggcctggcc
ctggccacgccggcgctgcagcaagccgctgcccgtggcgtgaagctgtccggtgatatc
gagctgtttgcccgtaacgccaaggcgccgatcatcgccatcagcggttccaacgcgaaa
agcacggtgaccacgctggtcggcgaaatggcggcagcggccggtaagcgtgtggctgtc
ggcggcaacctcggtaccccggcgctggacctgctcagcgacgacgtcgagctgtatgtg
atggagctgtcgagtttccagctggaaaccaccgaccagctcaacgctgaagtcgccacc
gtgctcaatgtcagcgaagaccatatggaccgctacagcggcctgccggcctatcacctg
gccaagcaccggatcttccgtggcgcacggcaagtggtggtcaaccgtcaggacgccctg
agccgcccgttgctggccgagaaccagccggtgtggaccttcggtctgaacacgcctgac
ttcaaggcctttggcctgcgcgaagagaatggcgaaaagtacctggcgttcgagttccag
aacctgatgccagtgcgcgagctgaaaatccgtggttcgcacaaccagtccaacgccctg
gcggcattggccctggggcatgcggtcggcttgccgatggacgccatgctgtccagcctg
cgcaccttcgccggtctggcgcaccgttgccagtggcttcgtgaacgcgacggcgtgaac
tggtacgacgactccaaggccaccaacgtcggtgccgctctggccgccattgaaggcctg
ggcgccgatatcgacggcaagctggtactggttgctggcggcgatggcaaaggtgcggat
ttcagcgctctgcgtgctccggtagcggcgcactgccgcgctgtcgtgctgctgggacgc
gatgccgaacgcctggcccaagcgctgggcgacagcgtaccgctggtccgggtgaaaagc
ctcgaagaagctgtgcagcaatgtgccgagctggcccagcctggcgatgccgtgctgctg
tcgccggcctgcgccagtctcgacatgttcaagaactttgaagagcgtgggcggctgttc
gcccaagccgtaggagggctggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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