KEGG   Pseudomonas alcaliphila: UYA_16000
Entry
UYA_16000         CDS       T06680                                 
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
pall  Pseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:pall00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pall03021]
    UYA_16000
Transcription machinery [BR:pall03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     UYA_16000
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2 KinB_sensor DUF4168
Other DBs
NCBI-ProteinID: APU31144
UniProt: A0A1L7G232
Position
complement(3491506..3492513)
AA seq 335 aa
MALIKKEAPEFDVDDELLLMEPGIVFGEVQGDEVEAPVARTKAKNATPSKQHKYIDYTRA
LDATQLYLNEIGFSPLLTPEEEVHFARLAQKGDPAGRKRMIESNLRLVVKIARRYVNRGL
SLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKE
LNVYLRAARELTQKLDHEPSAEEIANLLEKPVGEVKRMLGLNERVSSVDVSLGPDSDKTL
LDTLTDDRPTDPCELLQDDDLSQSIDQWLSDLTDKQREVVVRRFGLRGHESCTLEEVGQE
IGLTRERVRQIQVEALKRLREILEKNGLSSDALFQ
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggctctcatcaaaaaagaagcgccggagtttgacgtcgacgatgaactgctcctcatg
gagccaggcatcgttttcggcgaggttcagggcgatgaggtggaagcaccggtcgcacgt
accaaggccaagaacgccaccccctccaagcagcacaagtacatcgactacacccgggcg
ctagacgccactcagctttacctcaacgaaatcggtttctctcccttgctcactcccgaa
gaggaagtgcacttcgcgcgtctggcgcagaagggcgatcctgccgggcgcaaacgcatg
atcgagagcaacctgcgcctggtcgtgaagatcgctcggcgttacgtcaaccgtggtctc
tctctgctcgatctgatcgaggagggcaacctcggcttgattcgcgccgtggaaaaattc
gatccggagcgggggttccgtttctcgacctatgcaacctggtggatccgccagaccatc
gaacgcgccatcatgaaccagacgcgaaccatccgtttgccgattcatgtggtcaaggag
ctcaacgtatacctgcgtgcagctcgtgaactgacccagaagctcgaccatgagccttct
gcagaagaaattgccaacctgctggaaaaaccggtgggcgaggtcaagcgcatgctcggc
ctcaacgaacgagtgtcctcggtggacgtctcgcttggtccggattcggacaagacgctg
ctcgacaccctgaccgatgatcgcccgaccgatccctgcgaactgttgcaggacgatgat
ctgtcgcagagcatcgatcagtggctctccgacctgaccgacaaacaacgggaagtcgtt
gtgcgccgcttcggtctgcgcggccatgaaagttgtacccttgaagaagtggggcaggag
atcggcctgacccgcgagcgggtgcggcagattcaggttgaggcgctcaagcgtctgcgg
gaaatcctggagaagaacggcttgtccagcgacgccttgttccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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