KEGG   Pseudoalteromonas aliena: B0W48_04090
Entry
B0W48_04090       CDS       T04815                                 
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
paln  Pseudoalteromonas aliena
Pathway
paln00730  Thiamine metabolism
paln01100  Metabolic pathways
paln01240  Biosynthesis of cofactors
paln04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:paln00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    B0W48_04090
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    B0W48_04090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:paln03016]
    B0W48_04090
Enzymes [BR:paln01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     B0W48_04090
Transfer RNA biogenesis [BR:paln03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    B0W48_04090
SSDB
Motif
Pfam: ThiI THUMP Rhodanese QueC tRNA_Me_trans DUF1139
Other DBs
NCBI-ProteinID: AQP99053
UniProt: A0A1Q2GVB0
Position
complement(930851..932308)
AA seq 485 aa
MLKFIVKLHPEIAIKSRSVRKRFTKVLENNIKIVLRRVDEKVQVRNNWDNISVVTKLEDA
QVRLEFIDSLKRIPGIVQFIEVTETQFETLDDIYQKTIALVGHTIVGKTFCVRAKRIGQH
DFTSTDLERYVGGGLNQHIEGASVKLSRPEVTIRLEVKDDKAYIVSQTHFGMAGFPLPTQ
EDVLSLMSGGFDSGVASYQMIRKGARTHFLFFNLGGAAHEIGVKQASYFLWKKYSSTHKV
KFITIDFEPVVAEILENVENSQMGVVLKRMMMRAGSVVAQKLNIQALVTGESIGQVSSQT
LANLSVIDRVTETLILRPLIQNDKQEIINLARQIGTAEMAETMPEYCGVISKKPTVKAKI
EVIEAEEEKFDFDVLDTVVDNARIMDVRDIDVEAKQELKEAESVADLPAGAVVVDIRSPE
EEDASPLEIDGVEVIHLPFFRLATKFGDLPKNTDYYLYCDRGVMSQLQALMLHEQGFDTV
KVYRP
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgcttaaatttatcgtcaaactacaccctgaaatagccattaaaagccgttcagtccgt
aaacgctttactaaagtgttagaaaataacattaagattgtattgcgtcgtgttgacgaa
aaagtacaagtaagaaataactgggataatatttcagtggttaccaagcttgaagatgca
caagttcgccttgagtttatcgacagccttaaacgcatacctggcattgttcagtttatt
gaagtaaccgaaacgcagtttgaaacactcgatgatatctatcaaaaaaccatcgcttta
gttggtcatactattgtaggtaaaaccttttgcgtgcgtgctaagcgcatagggcaacac
gactttacctcaactgatttagagcgctatgttggcggtggattaaaccagcacattgaa
ggcgcaagcgttaaacttagccgcccagaagtaacaatacgcctagaagtaaaagacgat
aaagcttacattgtttcgcaaacgcattttggtatggcgggcttcccgttgccaactcaa
gaagatgtactttcgctgatgtctggtggctttgactctggcgtagcaagctatcaaatg
attcgaaaaggcgcgcgtacacactttttattctttaatttaggtggcgcagcgcacgaa
attggtgttaaacaagcaagctattttttatggaaaaaatacagttcaacacataaagtt
aaatttataactattgattttgaacccgttgtcgctgaaattttagaaaacgttgaaaac
agccaaatgggtgtcgtgcttaagcgtatgatgatgcgcgcaggtagtgttgtagcgcaa
aagctaaacattcaagcacttgttaccggagaaagtattgggcaagtatctagtcaaaca
ttagctaatttaagcgtgattgaccgtgttactgaaacgcttattttacgcccgcttatt
caaaacgacaaacaagaaattattaaccttgctcgccaaattggtaccgccgaaatggcc
gaaacgatgccagaatactgcggtgttatttctaaaaagccgactgttaaagccaaaatt
gaagtaatagaagccgaagaagaaaagttcgactttgatgtgcttgatacggtggtagat
aatgcacgtataatggatgtgcgcgatatcgatgttgaggctaagcaagagctaaaagaa
gctgagtcagttgctgatttacctgcgggcgcggtagttgttgatattcgctctccagag
gaagaagacgcatcgccacttgagatagacggagttgaagttatacacttaccatttttt
cgcttagcaactaagtttggtgatttaccaaaaaatacggactattatttatattgtgat
agaggcgtaatgagccagctacaggcacttatgttgcacgagcaaggctttgataccgta
aaggtttatcgtccataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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