KEGG   Pseudoalteromonas aliena: B0W48_06780
Entry
B0W48_06780       CDS       T04815                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
paln  Pseudoalteromonas aliena
Pathway
paln03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:paln00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    B0W48_06780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paln03021]
    B0W48_06780
   03400 DNA repair and recombination proteins [BR:paln03400]
    B0W48_06780
Enzymes [BR:paln01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     B0W48_06780
Transcription machinery [BR:paln03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     B0W48_06780
DNA repair and recombination proteins [BR:paln03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      B0W48_06780
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AQQ02036
UniProt: A0A1Q2H3U0
Position
1535764..1536039
AA seq 91 aa
MARVTVEDAVDAVGNRFDLILVAARRARQIAVGGKTPLVDPENDKPTVVALREIELGLVD
SASMDLIDREEQQHQEAAELAAVAAIVGGNQ
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcccgcgtaacagttgaagatgcagtagatgcagttggtaatcgttttgacttaatt
ttagttgcggctcgtcgtgcccgccaaattgctgttggtggtaaaactccactagtagac
cctgaaaacgataagccaacggttgttgctttacgtgaaattgaattaggtttagttgat
agtgcttcaatggacttaattgaccgtgaagaacaacaacaccaagaagcggcagaacta
gctgctgttgctgccattgttggtggcaatcaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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