KEGG   Pseudooceanicola algae: PSAL_013140
Entry
PSAL_013140       CDS       T06943                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
palw  Pseudooceanicola algae
Pathway
palw00740  Riboflavin metabolism
palw01100  Metabolic pathways
palw01110  Biosynthesis of secondary metabolites
palw01240  Biosynthesis of cofactors
palw02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:palw00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PSAL_013140 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PSAL_013140 (ribD)
Enzymes [BR:palw01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PSAL_013140 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PSAL_013140 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QPM90080
UniProt: A0A418SCQ0
Position
complement(1386694..1387809)
AA seq 371 aa
MIVGATKAEDDRYLALALSLGRRGQGQTWPNPAVGCVIVANGRVVGRGWTSPGGRPHAEV
QALAQAGPNARGATAYVSLEPCAHHGRTPPCAEALIAAGIVRVVAPLEDVDPRVEGKGFA
MLRAAGIAVTTGVRAAEAAQDHAGFFLNREQGRPLLTLKLALTLDGRIATATGESQWITG
PEARRQVHAMRARHDAVMVGAGTARIDDPSLTVRGLGVTRQPVRVVVSRRIDLPLMGHLA
RTAKDIPVWICHGRDADPSLVEAWQGLGATLLPCEVSGRQLEVASVLGALGTAGLTRVFC
EGGGALAATLLGADLVDELVVMSAGLLLGAEGRPALGAMGIDRLAEAPRLDLVESRIIGP
DVMTRWRRPIA
NT seq 1116 nt   +upstreamnt  +downstreamnt
gtgattgtcggagccaccaaggccgaggacgaccgctatctggcgctggccctgtcgctg
gggcggcgcgggcaggggcagacctggcccaatccggcggttgggtgcgtcatcgtcgca
aatgggcgcgtcgtgggccgcggctggaccagcccgggcgggcgtccccatgccgaagta
caggcgctggcccaggccgggccgaacgcccgcggcgccaccgcttacgtcagtcttgaa
ccctgcgcccatcatggtcgcacaccgccctgtgccgaggccctgatcgcggcgggtatt
gtccgtgtcgtggccccgctggaagatgtggaccctcgtgtcgaaggcaagggatttgcc
atgctgcgcgccgccgggatcgctgtcaccaccggcgtccgggcggcggaagcagcgcag
gatcacgccgggttctttttgaatcgggaacaggggcggcccctgctgacactgaaactg
gcgctgacgctggatggccggatcgccaccgcgaccggcgaaagccagtggattaccggc
cccgaagcccgccgtcaggtccatgccatgcgcgcgcgccatgacgcggtgatggtcggg
gccggcaccgcgcggatcgacgacccgtcgctgaccgtgcgcggccttggcgtcacccgg
cagcccgtgcgcgtggtggtctcgcgccggatcgacctgccgttgatgggccatctggcc
cgcaccgcgaaggatatcccggtctggatctgccatggtcgcgacgccgatccaagcctt
gtcgaggcctggcagggcctgggcgcgacgttgctgccctgcgaggtttcggggcggcag
cttgaagttgcctcggtcctgggcgcgcttggtacggcggggttgacgcgggtcttttgc
gaaggcggcggggcgctggccgcgaccctgctcggcgccgatctggtcgatgagcttgtc
gtgatgtccgccggcctgctgctgggggccgaagggcgcccggcgcttggcgccatgggg
attgaccggctggccgaagccccgcgcctggatctggtggaaagccggatcatcggcccg
gacgtgatgacccgctggcgccggcccatcgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system