KEGG   Pseudomonas amygdali: BKM19_002320
Entry
BKM19_002320      CDS       T05354                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pamg  Pseudomonas amygdali
Pathway
pamg00300  Lysine biosynthesis
pamg00470  D-Amino acid metabolism
pamg01100  Metabolic pathways
pamg01110  Biosynthesis of secondary metabolites
pamg01120  Microbial metabolism in diverse environments
pamg01230  Biosynthesis of amino acids
Module
pamg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BKM19_002320 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BKM19_002320 (lysA)
Enzymes [BR:pamg01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     BKM19_002320 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AVB12574
UniProt: A0A0N0GSZ1
Position
332517..333764
AA seq 415 aa
MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQEVAAELDVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIANAED
VYIRASQLPNLEVIGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDGEPRAYDIVGPICETGDFLAKGRELALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVAELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgccttcaactaccgcgacggtgagctgttcgcggaaggggtagcattgtctgcc
attgccgagcgcttcggcacgccgacctatgtctactcgcgcgctcatatagaggcgcaa
taccgtgcctacgccgatgcgctgagcggcatgccgcatatggtctgcttcgccgtaaaa
gccaactccaatctgggcgtgttaaatgtcctggcgcgtcttggcgccggtttcgacatt
gtttcgcgcggcgaactggagcgtgtgctggccgcaggcggcaaagccgagaagatcgtg
ttttccggcgtcggcaagacccgtgaagacatgcgtcgcgctcttgaagtcggcgtgcat
tgcttcaacgtcgaatccaccgacgagcttgagcgtctgcaggaagtggctgccgagctc
gacgttcgtgcgccgatatcgctgcgggtcaacccggatgtggatgcaggcactcaccct
tacatctccaccggccttaaagaaaacaaattcggcatcgccattgcaaatgccgaagac
gtttacattcgcgcctcgcaactgccaaacctggaagtgatcggggtcgactgccatatt
ggctcgcaactgaccacgctcgagccgttcattgatgcgctggatcgcctgctggacctg
gttgatcgcctgggcgattgcggcattcacctgcaccatatcgatctgggtggcggtctt
ggtgtgcgttatcgcgacgaagagcctccgctggcggccgactacatcaaagccgtgcgt
gagcgactggctggtcgtgatctggggctgttgttcgagccggggcgcttcatcgtggcc
aacgcaggcgcgctgctgacccgcgtcgaatacctcaagcacaccgagcacaaggatttc
gccatcgtcgatgcggcgatgaacgatctgatccgcccagcgctttatcaggcgtggatg
gacgtcacagcggtgcgcccgcgcgacggcgaacctcgtgcgtacgacatcgtcgggccg
atctgcgagaccggcgactttctcgccaaagggcgcgagctggcgctggccgaaggcgat
ctgctggcggtccattcggccggtgcctatggcttcgtcatgagttcgaactacaacacc
cgtggccgtgctgctgaggtactggtcgacggttcccaggcttttgaagtgcgtcgtcgc
gaaaccgtggccgagctgttcgctggcgaaagcctgctgccggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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