KEGG   Pseudomonas amygdali: BKM19_006345
Entry
BKM19_006345      CDS       T05354                                 
Name
(GenBank) peptidase M20
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
pamg  Pseudomonas amygdali
Pathway
pamg00300  Lysine biosynthesis
pamg01100  Metabolic pathways
pamg01120  Microbial metabolism in diverse environments
pamg01230  Biosynthesis of amino acids
Module
pamg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BKM19_006345
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pamg01002]
    BKM19_006345
Enzymes [BR:pamg01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     BKM19_006345
Peptidases and inhibitors [BR:pamg01002]
 Metallo peptidases
  Family M20
   BKM19_006345
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28
Other DBs
NCBI-ProteinID: AVB13266
UniProt: A0A2G4DC86
Position
complement(1167553..1168716)
AA seq 387 aa
MLDDPIALTRALLAFQTLNPPGDEEACAAFLAEQLSRHGFVCELQRFGERRFNLVAWLEG
DGPGKPLGFTGHLDTVPLGNATWSHSPFAGEIADGRLYGRGSSDMKAGIAAFIVACQRSR
AAIQRGPGVRLLLTGGEETGCDGARALCTDAPHLLGELGALLVGEPTANYPILGHKGALW
LRCASHGLTAHGAMPEEGVNAIYLAARHIDRAQTFEVGPAHHLMRKPTLNVGTISGGLNI
NSVPDYAEFTLDLRTAPNLDHDEIRTRLAAHLGNGAELSTLIDLPGVCADPDEPWVRQVF
ARCQALHDAPLQAQTVPYFTDAAVLLPAVGHPPTLILGPGEPSMAHKVDEYCEVSKLQQC
VELYAGLIEDWANIQSTAAAQHTNPSQ
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgctcgatgacccgatagccctgacccgtgcactgttagcgttccagaccctcaacccg
ccgggcgacgaggaagcgtgtgcggcttttcttgccgagcagctgagccgccacggtttt
gtctgcgagctgcagcgtttcggtgagcgccgtttcaatctggtcgcctggcttgagggc
gacggccccggcaaaccgctggggttcaccggccacctggataccgtaccgctcggcaat
gccacctggagtcactcgccgtttgccggtgagattgccgacggccggctgtacgggcga
ggatccagcgacatgaaagcgggcattgctgccttcatcgtggcctgccagcgcagccgt
gccgccattcagcgcggcccgggcgttcgcttgttgctcaccggcggagaagaaaccggc
tgtgatggcgcccgcgcactgtgcacggacgctccccatttgcttggcgaactcggcgca
ctgctggtcggcgaaccgactgccaactatccgatactcgggcacaagggcgcattgtgg
ctacgctgcgccagccacggtcttacggcgcatggagcaatgccggaagaaggcgtgaat
gccatctatctggccgcccgacatatcgaccgcgcacagacctttgaggtgggcccggcc
catcaccttatgcgcaagcccaccctgaacgtcggcaccatcagtggaggcctgaacatc
aactcggtcccggactacgcagagttcaccctcgacctgcgtacagcgccgaatctggac
catgatgagatccgcacgcgattagcggcgcatctgggcaacggtgcagagttgagtacc
ctgattgatttgcctggtgtttgcgccgatcccgacgagccttgggtccgacaggttttt
gcccgctgccaggctttgcatgacgcccctttgcaggcacagacagtgccctactttacc
gatgccgctgtgctgctacccgccgtcggtcacccgcccactcttattctcggcccggga
gagccgagcatggcccacaaggtggatgagtattgtgaggtcagcaaacttcaacagtgc
gtcgagctgtatgccggtttgatcgaagactgggcaaacattcaatccactgcagcagcg
caacacactaacccctcacaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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