KEGG   Pseudomonas amygdali: BKM19_010080
Entry
BKM19_010080      CDS       T05354                                 
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
pamg  Pseudomonas amygdali
Pathway
pamg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BKM19_010080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pamg03400]
    BKM19_010080
Enzymes [BR:pamg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     BKM19_010080
DNA repair and recombination proteins [BR:pamg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BKM19_010080
    RecFOR pathway proteins
     BKM19_010080
SSDB
Motif
Pfam: RuvC DUF3882
Other DBs
NCBI-ProteinID: AVB13910
UniProt: A0A2G4CS11
Position
1943558..1944082
AA seq 174 aa
MTLILGIDPGSRITGYGVVRDTGRGCVYVASGCIRTGSGELHERLQIVYRGVREVIKTYG
PVTMGIEKVFMARNADSALKLGQARGAAIVAGAEEALEIAEYTATQVKQAVAGTGGANKE
QVMMMVMHLLKLTQKPQIDASDALAIALCHAHTRSSLIPHGLSTARSRGGRLRL
NT seq 525 nt   +upstreamnt  +downstreamnt
atgactcttattcttggtatcgaccccggttcgcgaattaccggctatggcgtggtacgt
gacaccgggcgcggttgtgtctacgtcgcttccgggtgcattcgtaccggcagtggtgaa
ttgcacgaacgtttgcagatcgtttatcgcggggtgcgtgaggtcataaagacctacggg
ccggtgacgatgggcatcgaaaaggttttcatggcgcgcaacgccgattcagccctgaag
ctggggcaggccaggggcgcggccatcgtggcgggtgccgaggaggcgctggaaattgcc
gagtacactgccactcaggtcaagcaggcagtagcagggactggcggtgccaataaagag
caggtgatgatgatggtcatgcatttgctcaaattgacccagaagcctcagattgacgcg
tccgatgccctggctatcgcgctgtgtcatgcgcacacgcgctccagcctgattcctcac
gggttgagcaccgcgcgaagtcgcggcggccgtttgcgcctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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