KEGG   Planococcus antarcticus: BBH88_06175
Entry
BBH88_06175       CDS       T04428                                 
Name
(GenBank) DNA helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pana  Planococcus antarcticus
Pathway
pana03420  Nucleotide excision repair
pana03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pana00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBH88_06175
   03430 Mismatch repair
    BBH88_06175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pana03400]
    BBH88_06175
Enzymes [BR:pana01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BBH88_06175
DNA repair and recombination proteins [BR:pana03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBH88_06175
   MMR (mismatch excision repair)
    Other MMR factors
     BBH88_06175
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_12 AAA_30 AAA_11 ResIII
Other DBs
NCBI-ProteinID: ANU09913
UniProt: A0A1C7DFB5
Position
complement(3118846..3120972)
AA seq 708 aa
MSQFFERKKQELGVQLNKIQRKAVERTEGPLLLLACPGSGKTTTMIMRIGYLIEEKGVLP
KRIKAITFSKASANDMLQRYKRFFPSLQPVDFSTIHSLAFQITRDYFSGSPYVMIEGSET
NGLHKKKLLREIYRTENDEPITDDQLEELISFISFVKNKMSPRKQWAKLKEPFPGAIEIL
KTYEAFKENYDVRLVDFDDMLSLAYEALEKDGKLLAKYQERWDYVMTDESQDTSLIQHAI
VEKLVASHQNLCVVADDDQSIYTWRAAEPTYLLKFRTVYPDAYIMKMERNYRSSQNIVHT
ANEFIKTNKKRHDKNMFTKQPEGDPIVLKRLSSEEAQFKYVMKELKELTDYGDVAILYRN
NSSSTLLMSELERLGIPFYMKDSDNRFFSHWIVEDMLNFMRFSLKPERIDIYSKVASKTN
AYWSGSQLKMLSRMNPTGEHAFDKINLTITLKDYQIKILAEQKKWFQALNSMKPLKVIRT
IRGEMGYDQMLASRAEKFGMKMTYLAQILATLEQIAEPLESMTAFAKRLKQLEQVTQQAK
KEKTDDMLTLSTFHSSKGLEFERVYMLDLVEGVIPTEEDAETPDTLEEARRLFYVGMTRA
KSHLELISYGNESRFANEVRNLIAPEKSQTKPQRTAAKTPIKVKVPNNPNAIDSEEALHE
GVQVRHRVFGTGEIVERDKERISIQFAKERKDLMIDICLSYRLLEIIE
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgagccaattctttgaaagaaaaaagcaggaacttggagttcagctaaataaaatacag
cgaaaagcggtagaacgcacagaaggccctctactgttgctagcttgccccggatccgga
aaaacaacgacaatgattatgcgcatcggttacctgattgaggagaaaggtgtgctgccg
aagcgaatcaaagcaatcacgttcagcaaagcatccgccaacgacatgcttcagcgctat
aagcgattcttcccttctctacagccagtcgatttttcaaccattcatagcttagctttc
cagattacgcgcgattatttttcgggatcgccttacgtcatgatagaaggcagtgagaca
aatggtctccacaagaaaaagctgcttcgggaaatataccgaacggaaaacgatgagccg
attacggatgatcaattagaggaattgatttcattcatcagttttgtcaaaaacaaaatg
tcgccacgaaaacaatgggccaaactgaaggagccgtttccgggtgcgatcgaaattttg
aaaacttacgaagctttcaaagagaactatgacgtaagattagttgattttgacgacatg
ctgtcactggcttacgaggcgctggagaaagacggaaaattgttagcaaagtaccaggaa
cgctgggattacgtcatgacagacgagagtcaggacacgtcgctgattcagcatgccatt
gtggaaaagctggtggccagccaccaaaatctttgcgttgtagctgacgacgatcagtct
atttatacgtggagagctgctgaaccaacttatttgttaaagtttagaaccgtttatcca
gacgcctatatcatgaaaatggaacgcaattaccgctcttctcaaaacattgttcacaca
gctaacgaatttatcaaaaccaataaaaaacggcatgacaaaaatatgttcaccaagcaa
ccagaaggcgatccaattgttttaaaacgcttgagctcagaagaagcgcagtttaaatac
gtcatgaaagagctcaaggaattgactgattatggcgatgtagccattttgtaccgcaat
aattcgtcttcaactttattgatgagtgagcttgagcgtctaggcattcccttctatatg
aaagattccgataatcgctttttctctcattggattgtagaagacatgttaaattttatg
cgtttcagcttgaagcccgaacgcattgatatatattcgaaagttgcttccaaaaccaat
gcctattggtcaggcagtcaattaaaaatgctcagtcgcatgaatccgaccggtgaacat
gcttttgataaaattaatttaacgatcacgttaaaagactatcaaataaaaattttagct
gaacagaaaaagtggttccaagcattaaacagcatgaaaccattgaaagtcatccggacg
atccgaggagaaatgggctatgaccaaatgcttgcgagccgcgcagagaaattcggcatg
aaaatgacctacttggcacagattttagcaacattggaacaaattgcggaaccgcttgaa
tctatgacagctttcgcaaaacgcctgaaacagctggaacaagtaacacaacaagcaaag
aaagaaaaaaccgatgacatgttgactttatcgacattccacagctctaaaggtctggaa
tttgaacgggtttatatgcttgatttggtagaaggtgttattccaactgaagaagatgcg
gaaactccagatactttggaagaagcgcgccgcttgttctatgtcggaatgacaagagcg
aaaagccatttggagctgatcagctatggcaatgaatctcgctttgcgaatgaagtgcgc
aatctgattgctcctgaaaaaagtcagaccaaaccgcaacggactgcggctaaaacaccc
atcaaagtaaaggtaccgaataatccaaatgccatcgattcggaggaggcattgcacgaa
ggggttcaggtccgccaccgggtttttggtacaggagaaattgttgagcgagacaaggaa
cggatttccattcaattcgcaaaagaacggaaagacttgatgattgatatttgtttgagt
tatagattactggagattatcgagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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