KEGG   Paenisporosarcina antarctica: E2636_10065
Entry
E2636_10065       CDS       T05927                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
panc  Paenisporosarcina antarctica
Pathway
panc03030  DNA replication
panc03430  Mismatch repair
panc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:panc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E2636_10065
   03430 Mismatch repair
    E2636_10065
   03440 Homologous recombination
    E2636_10065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:panc03032]
    E2636_10065
   03400 DNA repair and recombination proteins [BR:panc03400]
    E2636_10065
Enzymes [BR:panc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E2636_10065
DNA replication proteins [BR:panc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     E2636_10065
DNA repair and recombination proteins [BR:panc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     E2636_10065
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon HHH_3 DEDDh_C RNase_H_2 DUF1359
Other DBs
NCBI-ProteinID: QBP41458
UniProt: A0A4P6ZZ04
Position
complement(2015794..2020122)
AA seq 1442 aa
MNNEQDAKSRLQLLLQQLELTTDEQQLHFEEASLNRLTVHKKERVWRFTIQVEKILPFNM
FQLFNMRLREKFAGIADIKLTLTCAHPQVHAETIAAYWPFILQEIADMSPPLRNRLQSQI
PSFNGQTILFTCEHEIEFQTLKNKYATRISDVYSSFGFPVFPIDFKLIEEKAELVEEQQA
FMEQRKKEEDELGRKALADMQKREKERQANPGATLNGPFQLGTPIKANEPVIEIQQIQDE
ERRITIEGYVFDVEVRELRSGRSLLTVKVTDYTDSILVKMFSRDKEDAELMGLLKKGTWL
KVRGSVQNDTFVRDLIVMAQDIMEIKVDSRKDTAPTEEKRIELHLHTPMSQMDAVSSVDA
LVSQAAKWGHPAVAITDHAVVQSFPDAYAAGKKYGIKIIYGLEIYMVNDGVPIAYEEEHR
ALADATYVVFDVETTGLSAVYDTIIELAAVKIKDGQEIDRFERFVNPHHALSATTINLTG
ITDDMVRNAPDIEEVIKQFHDWIGDSILVAHNASFDMGFLYVGYKKCGLEKTIHPVIDTL
ELSRFLHPEMKNHRLNTMAKKFNIDLTQHHRAIYDAEATGYLLLNLLKEAEEKNIHYHDE
FNHQTGNGDSYKRARPTHCTLLATDLTGLKNLFKLVSSSHMNTFFRIPRIPRSVLVKHRK
GLLIGSGCEKGEVFQGLMQKSPEEVEEIAKFYDYLEVQPKEVYAHLIELELVRDEWNLED
IIRKMIKLGKKLALPVVATGNVHYVNENDAIFRQILIGGQGGANPLNRHRLPKVHFRTTN
EMLDAFAFLGEETAKQIVVENSHKISERIEEIKPIKDDLYTPKIEGSDEEVRLMSYDMAK
QIYGETLPEIVEARIEKELTSIIGHGFAVIYLISHKLVKKSLNDGYLVGSRGSVGSSLVA
TLMEITEVNPLPPHYICPSCQNAEFFDDGSVSSGFDLPNKICTKCETPYKKDGQDIPFET
FLGFKGDKVPDIDLNFSGEYQSIAHNYTKVLFGEDNVFRAGTIGTVAEKTAYGYVRGYAN
DHNLTMRGAEIDRLVQGCSGVKRSTGQHPGGIIVVPDYMDIFDFSPIQYPADAQDSEWKT
THFDFHSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDVEVMKIYSGTESLGVT
QEQIGCKTGTLGIPEFGTRFVRQMLEETKPSTFSELVQISGLSHGTDVWLGNAQELIQNG
TCQLSDVIGCRDDIMVYLIYQGLEPSLAFKIMESVRKGKGLTPEFEADMRLNEVPEWYID
ACKKIKYMFPKAHAAAYVLMAVRIAYFKVHFPILYYAAYFTVRAADFDLHAMTKGSASIR
AKIDEINAKGLDAAPKEKSLLTVMEIALEMCERGYHFKKVDLYESKATEFVIDGKGLIPP
FNAIPGLGTNVAKTIVEARKNGEFLSKEDLGQRGRVSKTLLEYMNLLGCLDGMPDANQLS
LF
NT seq 4329 nt   +upstreamnt  +downstreamnt
atgaataacgaacaagatgccaaaagtagattacaattattgttacaacagttagaactt
actactgatgaacagcaacttcattttgaagaagcttctttgaatcgtttgactgtacat
aagaaagaacgtgtatggcgttttacaattcaagttgagaaaatcctgccatttaatatg
tttcagttgtttaacatgcgcttacgagaaaaattcgcgggcattgcggatattaaatta
acacttacatgcgctcatccacaagtccatgcagaaacaatcgcagcctattggccattt
attttacaagaaattgccgacatgtcaccaccactaagaaatcgattgcaatcacaaata
ccatcatttaatggacaaactatcctctttacatgtgaacatgaaattgaattccaaaca
ttaaaaaataaatatgcaactagaatttcagatgtttactcttcatttgggttccctgtt
tttcctattgattttaaattaatcgaggaaaaggctgagcttgtagaagaacaacaggct
ttcatggagcaacggaaaaaagaagaagatgaacttggaagaaaagcgttagcagatatg
caaaaacgtgaaaaagagcgtcaagcaaatcctggtgcaacattgaatggaccattccaa
cttggaactccaattaaagccaatgaaccagttattgaaattcagcaaatccaggatgaa
gaacgtcgtattacaattgaaggttatgtatttgatgttgaagtcagagaactacgtagt
ggtcgttctttattaacagtcaaagttacagattacactgactcgattcttgttaaaatg
ttctcgcgagataaagaggatgctgagctcatgggcttacttaaaaaagggacatggtta
aaagtacgcggttcagttcaaaatgacacgtttgtacgtgacttgatagtcatggcacaa
gatatcatggaaattaaagtggattctagaaaagatacagctccaacggaagaaaaacga
attgaattgcatttgcataccccaatgagccaaatggatgcagtatcttcagttgatgct
ttagtaagtcaagcggccaagtgggggcaccctgcagtagccattacggatcatgcagtt
gtacaatcttttccggatgcatatgcagctgggaaaaagtatggaattaaaattatttat
ggtttagaaatatatatggtgaatgatggtgtacctattgcttatgaggaagagcatcgt
gcattagcagatgcaacttatgtcgtttttgacgttgaaacgacaggactgtctgccgta
tatgacaccatcattgagcttgccgctgtgaaaataaaggacggccaagaaatagacaga
tttgaaagatttgtaaacccacaccatgcgttgtctgcaacaaccattaatttaacaggc
attacggatgatatggtaagaaatgctccagacattgaagaagtgattaaacaattccat
gactggattggagacagcattttggtcgcccacaatgcttcatttgatatgggattcttg
tatgtaggttataaaaaatgtggactagaaaaaacgattcacccagtcattgatacattg
gaattgtctcgctttttgcatccagaaatgaaaaaccatcgcttaaatacgatggcaaaa
aaattcaatattgatcttactcagcatcatcgagcgatttatgatgctgaagcaacaggg
tatttacttttaaatttattaaaagaagccgaagaaaaaaacattcactatcatgatgaa
tttaatcaccaaacaggcaatggagattcatacaagagggctcgtccaacacactgcaca
ttattggcgacagatttaacgggtttaaaaaacttatttaaacttgtttcttcttctcat
atgaatacatttttccgtattccgcgcatcccccgttccgttttagttaagcaccgtaaa
gggctattaattggatccggttgcgaaaaaggagaagtatttcaaggattaatgcaaaag
tctccagaagaagttgaagaaattgcgaagttctatgattatttagaagttcagccaaaa
gaagtttatgcacatttaattgaactcgaacttgtgcgggatgaatggaatcttgaagat
attattcggaaaatgattaaactcggaaaaaaattagcacttcctgttgtggcaactggt
aacgttcattatgtaaatgaaaatgatgcgattttcagacaaatcttaattgggggtcaa
ggtggagccaatccgctaaaccgtcataggttacctaaagttcattttcgaaccacgaat
gagatgttagatgcatttgcctttttaggagaagaaacagcgaagcaaatcgtagtggaa
aatagtcataaaatatcagaaagaattgaagaaataaaaccgattaaagacgatttatat
acacctaagattgaaggctctgatgaagaagttcgcttgatgagctatgatatggccaaa
caaatttatggagaaacacttcctgaaattgttgaagcgcgaattgaaaaagaactgaca
tcaattattggtcacggatttgcagttatatatttaatttctcacaaattagttaaaaaa
tctttaaatgatggatatttagtagggtcacgtggttctgtaggttcttcacttgtagca
acacttatggaaattacagaagtaaacccattgcctccacattatatttgtccatcttgt
caaaatgctgaattctttgatgatggttccgtgagttcgggatttgatctaccaaataaa
atctgtacaaaatgtgaaacgccatacaaaaaagatggacaggatattccgtttgagacg
ttccttggttttaaaggagacaaagttcccgatattgatttaaattttagtggagaatat
cagtctattgcgcataactatacgaaagttctttttggtgaagataatgtattcagggca
ggtacgattggtactgttgctgagaagacagcttatggttacgtacgaggttacgcgaac
gatcataacttaacgatgcgcggtgcagaaattgatcggctcgtacaaggatgttctggg
gtcaagcgctctaccggtcaacatccgggtggaataatcgttgtaccagactatatggat
attttcgacttctcgcccattcaataccctgctgatgcgcaagactctgagtggaaaacg
acacactttgatttccattctattcacgataatttattgaaactagatattcttggacat
gatgatccaacagtcattcggatgttacaagatttatcagggatcgatccaaaaacgatt
ccaacagatgatgttgaagtcatgaaaatttatagtggaactgaatcactaggggtcaca
caagaacagattggatgcaagacaggtactttaggaattcctgagtttggtacacgtttc
gttcgtcaaatgttagaagaaacgaaaccgtcaacattctctgagcttgttcaaatttca
ggtttatctcatgggacagatgtatggctagggaatgcacaagaacttattcaaaatggt
acatgtcaattatccgatgtaattggttgtcgagatgatattatggtctatttaatttat
caaggtctagaaccgtcactcgcatttaaaatcatggaatcggtgcgtaaagggaaaggc
ttaactcctgagtttgaagccgatatgcgtttaaacgaagtacctgaatggtatatagat
gcatgtaaaaagattaaatatatgtttccaaaggcccatgcggcagcatatgtattaatg
gccgttcgtattgcatacttcaaagttcattttccaatcctgtattatgcagcgtacttt
actgttcgcgcagcggactttgacttgcacgctatgacaaaaggttctgcatcaattcgt
gcaaaaatagacgagattaatgccaaaggtttggatgccgcgccaaaagaaaaaagctta
ctgacagtaatggaaattgctcttgaaatgtgtgaacgcggataccactttaaaaaagtc
gacttatatgaatcaaaggcaacggaatttgtaatagatggtaagggattaatacctcct
ttcaatgctattcctggcttaggaactaatgtggcgaaaacaattgttgaagctcgtaaa
aatggtgagtttctttctaaagaagatttaggacagcgagggcgtgtttctaagacgtta
cttgagtacatgaatttactcggttgtttagatggaatgccagatgcaaatcaattgtca
ctgttctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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