KEGG   Pantoea sp. PSNIH2: PSNIH2_16110
Entry
PSNIH2_16110      CDS       T03514                                 
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
panp  Pantoea sp. PSNIH2
Pathway
panp00250  Alanine, aspartate and glutamate metabolism
panp00310  Lysine degradation
panp00350  Tyrosine metabolism
panp00650  Butanoate metabolism
panp00760  Nicotinate and nicotinamide metabolism
panp01100  Metabolic pathways
panp01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:panp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    PSNIH2_16110 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    PSNIH2_16110 (gabD)
   00310 Lysine degradation
    PSNIH2_16110 (gabD)
   00350 Tyrosine metabolism
    PSNIH2_16110 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    PSNIH2_16110 (gabD)
Enzymes [BR:panp01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     PSNIH2_16110 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     PSNIH2_16110 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     PSNIH2_16110 (gabD)
SSDB
Motif
Pfam: Aldedh DUF1487
Other DBs
NCBI-ProteinID: AIX75145
Position
complement(3476429..3477880)
AA seq 483 aa
MPHSLRDNDLFQTGCLIDGQWKTLNETFDVLNPATGEVIAQVAKGGKKETEQAIAAAEKA
FPAWRALTAKQRSEILYRWYQLIIENKRWLGELMTAEQGKPLKEAEGEVEYAASFIQWFA
EQAKRINGEIIPPAKTGARILATREPIGVVAAITPWNFPMAMLTRKLGPALAAGCTGIIK
PANNTPLSAFALLALAKKAGVPDGVLNGVAGDTHAISDAIMASGAVRKISFTGSTAVGKT
LMRNAAETMKKISMELGGNAPYIVFEDADIDAAVKGAIANKFRNAGQVCVSVNRFFIHEA
VYDRFVNQLADEVNKLKVGNGMDEGVVVGPLINAAAVEKVEEHVKDAQAKGGRIVAGGAR
HALGGNFWQPTVIADASEEMKLAREETFGPVAACFRFASEEEVIQRANATEYGLAAYFYT
QNLQRVFRVSAALESGMIGINECAVSTELAPFGGVKESGLGREGSVLGIEEYLEVKALHI
GGL
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgcctcattccctgcgggataacgaccttttccagaccggctgcctgattgacggccag
tggaaaactctcaatgaaacgttcgacgtgctgaacccggccaccggcgaggtcatcgcg
caagtcgcgaagggcggtaagaaagagacggaacaggccatcgcggcggcggaaaaggcc
tttcccgcctggcgtgcgctgacggcgaagcagcggtcggagatcctttaccgctggtat
cagctgattatcgaaaataaacgctggctgggcgaactgatgacggcggagcagggcaag
ccgctgaaagaggcggaaggcgaagtggaatacgccgccagctttattcagtggttcgcc
gagcaggccaaacgcattaacggcgagatcattcccccggcaaaaaccggcgcgcgcatt
ctggcgacgcgcgagccgattggcgtcgttgcggcgattacgccgtggaatttcccaatg
gcgatgctgacgcgcaagctgggcccggccctggccgcaggctgcaccgggattatcaaa
ccggccaacaacacgccgctttccgctttcgcgctgctggcgctggcgaaaaaagcgggc
gtgcctgacggcgtgctgaacggcgtcgccggcgacacccatgctatcagcgacgctatt
atggccagcggcgcggtgcgcaaaatctcctttaccggctcgaccgccgtggggaaaacg
ctgatgcgcaacgccgccgagacaatgaaaaaaatctcgatggagctgggcggcaacgcg
ccttacatcgtatttgaagatgcggatatcgatgcggcggtaaaaggggccatcgctaat
aaattccgcaacgcaggccaggtttgcgtcagcgttaaccgcttctttattcatgaggct
gtatacgatcgcttcgtcaatcagctggcggacgaagtgaataaactgaaggtcggcaac
ggcatggatgaaggcgtggtggttggtccgttgattaacgccgcagcggtggagaaagta
gaggaacatgtcaaagacgcgcaggctaaaggcgggcgcatcgtggcgggcggcgcgcga
cacgcgctgggcgggaatttctggcaaccgacggtgattgccgacgccagcgaagagatg
aagctggcgcgcgaagagacctttggtccggtagccgcctgcttccgcttcgccagcgaa
gaggaggtgattcagcgcgccaacgcgacggagtatggactggcggcctatttttacacg
cagaatctgcaacgggtctttcgcgtctccgccgcgctggaaagcggcatgattggcatt
aacgagtgcgccgtctccaccgagctggccccgttcggcggcgtaaaagagtctggtctt
ggacgcgaaggttcggtattgggtatcgaggagtatctggaagtaaaagccctgcatatt
ggtggcctttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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