KEGG   Pantoea sp. SO10: FCN45_00855
Entry
FCN45_00855       CDS       T06053                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pans  Pantoea sp. SO10
Pathway
pans03420  Nucleotide excision repair
pans03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pans00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FCN45_00855 (uvrD)
   03430 Mismatch repair
    FCN45_00855 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pans03400]
    FCN45_00855 (uvrD)
Enzymes [BR:pans01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FCN45_00855 (uvrD)
DNA repair and recombination proteins [BR:pans03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FCN45_00855 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     FCN45_00855 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor AAA_30 UvrD_C_2 AAA_11 PhoH DUF6658
Other DBs
NCBI-ProteinID: QCP58020
Position
189243..191405
AA seq 720 aa
MDVSDLLDGLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIDQLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSDDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDEGLRPKHIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFSNVLVDEFQDTNNIQYAWIRMLAGDS
GRVIIVGDDDQSIYGWRGAQVENIQRFLQDFPGAETIRLEQNYRSTNNILKAANTLIANN
NGRLGKELWTDGSDGEKISLYCAFNELDEARFVVNRIKSWHENGNALQDCAILYRSNAQS
RVLEEALLQGSMPYRIYGGMRFFERQEIKDALAYLRLMANRNDDAAFERVVNTPVRGVGD
RTLDVVRQTARDQQLTLWQATRELLQNKALAGRAASALQRFCELVDSLASETAEMPLHVQ
TDRVIKDSGLWVMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTMHSAKGLEFSQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMVKLTLTYAESRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPVSHQRMG
TPIAQNDSGFTLGQRVRHAKFGEGTIINLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttctgatctgcttgacggcttgaatgacaaacagcgcgaggcggtcgccgca
ccgcgcagcaacctgctggtgctggccggagcaggcagtggcaaaacccgtgtgctggtg
catcgcatcgcctggctgctgtcggtagagaactgctcgccgtattcgattatggcggtt
accttcaccaacaaagcggcggcggaaatgcgccatcgtatcgatcagctgatcggcacc
agccagggcggcatgtggattggcactttccacggcctggcgcaccgtttactgcgcgcg
catcaccttgatgccggcttgccccaggatttccagatcctcgacagcgacgatcagctg
cgtctgctgaagcgcctgatcaaagcgatgaaccttgatgagaaacagtggcctgcgcgt
cagggcatgtggtacatcaacggcaaaaaagatgaaggcctgcggccaaaacacatcgaa
agctacggcaatccggttgaacaaacctggctgcgcatctatcaggcgtatcaggaagcc
tgcgatcgcgccggtttagtggatttcgccgagctgctgctgcgcgcccacgaactctgg
ctgaacaagccgcatatcctgaaccattaccgtgagcgtttcagcaacgtgctggtggat
gagttccaggataccaacaacattcagtacgcgtggattcgcatgctggcgggtgatagc
ggccgcgtgattatcgtcggcgatgacgatcagtcgatttacggctggcgcggtgcgcag
gtggagaacatccagcgcttcctgcaggattttcccggcgcggaaaccattcgcctggag
cagaactatcgctcgaccaacaacattctgaaagcggcgaacacgctgatcgccaacaac
aatggccgcctcggtaaagagctgtggaccgacggcagcgatggtgaaaagatctcactc
tactgcgcattcaacgagctggatgaagcgcgctttgtggtcaatcgcatcaaaagctgg
cacgagaacggcaatgcgctgcaggattgcgccattctctaccgcagcaacgcccaatcg
cgcgtgctggaagaggcgctgctgcaaggcagcatgccgtatcgcatttatggcggcatg
cgcttcttcgagcgtcaggagattaaagatgcgctggcctatctgcgtttaatggccaat
cgcaatgacgatgcagcctttgagcgtgtggtgaacacgccggtgcgcggcgtcggcgat
cgtaccctcgatgtggtgcgccagaccgcgcgcgatcagcaactcaccttgtggcaggct
acgcgcgagctgttgcagaacaaagccttagccggacgcgccgcctcggcgctacaacgc
ttctgcgagttggtcgattcactggccagcgaaaccgccgagatgccgctgcatgtgcaa
accgatcgcgtgattaaagactccggtttatgggtgatgtacgagcaggagaagggcgag
aaaggccaggcgcgtattgaaaaccttgaggaactggtcacggcaacgcgccagttcagc
tatcaggacgaagacgaagatctgatgccgctgcaggcgttcttatcacatgcggcgctg
gaagcgggtgaaggtcaggccgacaaatggcaggacgcggtgcagctgatgaccatgcac
tcggcgaaagggctggagttcagccaggtatttatcgtcggcatggaagagggcatgttc
ccgagccagatgtcgctggatgaaggcggtcgtctggaagaggagcgccgtctggcttac
gttggcgtgacgcgtgccatggttaagctgacgcttacctatgctgaaagccgtcgtctt
tatggtaaggaagtgtatcaccgtccatcacgcttcatcggcgagctgccggaagagtgc
gtggaagaggtgcgtttgcgcgccagcgtcagccgtccggtgagccatcagcgcatgggc
acgcccatcgcgcaaaatgacagcggcttcacgctcggccagcgcgtgcgtcacgccaag
ttcggtgaaggcaccatcatcaacctcgaaggcagcggtgaacacagccgtttgcaagtg
gcgtttcagggccagggcatcaagtggctggtggcggcttacgcccgtctggaaacggtg
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system