KEGG   Pantoea sp. SO10: FCN45_10295
Entry
FCN45_10295       CDS       T06053                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
pans  Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:pans00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pans03016]
    FCN45_10295
Enzymes [BR:pans01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     FCN45_10295
Transfer RNA biogenesis [BR:pans03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    FCN45_10295
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 ODP PilZ
Other DBs
NCBI-ProteinID: QCP59743
Position
2213016..2214950
AA seq 644 aa
MFQDNPLLAQLKEKLHAQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
SAVIHTDKDRESAEPETLVEPFLTRFVGRVQKKDDRLSIVPDHPLLKEAIQCRAERGVTH
DFQNGDWAVAEMRRHPLKGDRGFYAELTEFIVTADDHLAPWWVTLSRHNLERQAPDVGFG
EMLDENLQREDLTALNFVTIDSASTQDMDDALYVEEAADGNLILTIAIADPTAYVAEGSE
LDKLASKRAFTNYLPGFNIPMLPRELSDDVCSLRPNERRPALACRVTVLKDGSLADDVHF
FAAWIESKAKLVYDEVSDWLENSGSWQPENDAIAQQIRLLHQVCLARSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIISEPRRIANRIVEESMILANVCAAKVLQEKLGFGIYNLHTGFD
LANAEQAAGVLAGHGITVDPQAITTLEGFRQLRRQLDAQPTQYLDSRIRRFQSFAEVGTE
PGPHFGLGLEAYATWTSPIRKFGDMINHRLLKAIVRGESTGRPQDELTTIMSERRRLNRM
AERDVGDWLYARFLAPFAATDRKFSAEIIDVSRGGMRVRLLENGAVAFIPAPFIHAMRDE
LVCSQESGTVQIKGEVAYRVTDIIDVTIAEVRMETRSVVARPAA
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgttccaggataatccgctgctcgcgcagcttaaagagaagcttcacgcgcagactccg
cgcgtcgaaggtgttgttaaaggtacggaaaaaggctttggcttcctcgaagttgatgcc
cagaaaagctacttcattccgccaccgcagatgaagaaagtgatgcacggcgaccgtatt
tcggccgtgatccacaccgataaagaccgcgagagtgccgagccggaaaccctggttgag
ccgttcctgacccgctttgtcggccgcgtgcagaagaaagacgatcgcctgtcaattgtg
ccggatcatccgctgctgaaagaggcgattcagtgccgcgccgaacgtggcgtgactcac
gatttccagaacggcgattgggcggtagcagagatgcgtcgtcacccgctgaaaggcgat
cgcggtttctatgctgaactgaccgaattcattgtcactgcggacgatcacctcgcgccg
tggtgggtaacgttgtcgcgccataacctcgaacgtcaggctccggacgtcggttttggt
gagatgctcgacgaaaatctgcagcgtgaagatttgaccgcactgaacttcgtcaccatc
gacagcgccagcacccaggatatggatgatgcgctgtacgtggaagaggctgccgacggc
aatctgatcctgaccatcgctatcgccgatccaaccgcttacgtggcagaaggcagcgag
ctggataagctggcgtcgaaacgcgcgttcaccaactatctgccgggcttcaacattccg
atgctgccgcgcgaactctctgacgacgtctgttccctgcgtccgaacgagcgtcgtccc
gcgctggcttgtcgcgttaccgtgctgaaagatggcagcctggctgatgacgtgcatttc
tttgctgcgtggatcgagtcgaaagccaagctggtttatgacgaagtttctgattggctg
gaaaacagcggcagctggcagcctgaaaacgacgccattgctcagcagattcgcctgctg
catcaggtttgcctggcgcgcagcgaatggcgtcaaacccacgcgctggtgtttaaagat
cgtccggactaccgctttgtgttgggcgaaaaaggcgaagtactggatatcatctccgag
ccacgtcgcatcgcgaaccgcatcgttgaagagtcaatgattctggctaacgtctgtgcc
gcgaaagtgctacaggagaaactgggcttcggtatctataacctgcacaccggtttcgat
ctggccaatgctgagcaagccgctggcgtgctggcgggtcatggcatcaccgtggatccg
caggcgattaccacgctggaaggcttccgccagctgcgtcgtcaactcgatgcgcagcca
acccagtatctggatagccgcattcgtcgcttccagtcgtttgcagaagtcggcaccgag
ccgggcccgcactttggtcttggcctcgaagcctacgcgacctggacttcgccgattcgt
aagttcggcgacatgatcaaccatcgcttgctgaaggcgatcgtgcgcggtgaaagcact
ggccgtccgcaggatgagctgaccaccatcatgagcgaacgtcgtcgcctgaaccgcatg
gccgagcgcgatgttggggactggttgtatgcccgcttccttgcaccgtttgccgctacc
gatcgcaagttcagcgccgagatcatcgacgtgtctcgcggcggcatgcgcgttcgtctg
ctggagaatggcgcggtagccttcattcctgcgccgttcatccacgcgatgcgtgatgag
ctggtgtgctcgcaggaaagcggcaccgtgcagataaaaggtgaagtcgcttaccgtgtc
actgacatcatcgacgtgaccatcgccgaagtgcgtatggaaacccgcagcgtggtcgcg
cgtcctgccgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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