KEGG   Pantoea sp. PSNIH1: PSNIH1_05230
Entry
PSNIH1_05230      CDS       T03464                                 
Name
(GenBank) transcriptional regulator
  KO
K05499  LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pant  Pantoea sp. PSNIH1
Brite
KEGG Orthology (KO) [BR:pant00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pant03000]
    PSNIH1_05230
Transcription factors [BR:pant03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    PSNIH1_05230
SSDB
Motif
Pfam: Peripla_BP_3 Peripla_BP_1 LacI Peripla_BP_4 HTH_Tnp_ISL3 TetR_N HTH_Crp_2 HTH_IclR HTH_6 MarR_2
Other DBs
NCBI-ProteinID: AIX49683
Position
1062574..1063605
AA seq 343 aa
MDPKQTSSAATMKDVAEHAGVSTATVSRALMNPEKVSAATRQKVEQAVIATGYASHGLSR
NARRNETRTILVIVPDICDPFFSEIIRGIEVTAAQQGYLVLIGDCAHQDHQEKTFLDLML
TRQIDGMVLLGSQLPFDADPEALRSLPPMVMGNEFAPEMALPTVHIDNLTAAFEAVNHLL
QLGHRRIACITGPEAVPLSQYRLQGYIQALRRSSIPVEPMFIVRGDFSFEAGARALKQLM
SLPQPPEALFCHSDLMALGAMNQARKLGMRIPQDLSIVGFDDIELARYYEPPLTTVAQPR
FDIGREAMLLLLDELQGKRVNNGSRLLDAELRVRGSTAPAKKR
NT seq 1032 nt   +upstreamnt  +downstreamnt
ttggacccgaagcaaacttcatctgctgccacgatgaaagatgtggctgagcacgcaggc
gtctctacggcgaccgtttcccgggcgctgatgaatccggagaaagtgtcagccgcaacc
cggcaaaaagtcgagcaggcggtcattgcgacaggctatgcatcgcatggcctgtcgcgc
aatgccagacgcaatgaaacccggactatcctggtgattgtgcccgatatctgcgatccc
ttttttagcgaaattatccgcggcattgaggtcaccgccgcgcagcaggggtacctggtg
ctgattggcgactgcgcgcatcaggatcatcaggaaaaaacctttcttgatctgatgctg
acgcgacagattgacggcatggtgctgctgggttcacagctgccgtttgacgccgatcct
gaagcgctgcgcagcctgccgcccatggttatgggaaatgaattcgcgccggagatggcg
ctgcccaccgtgcacattgacaacctgaccgcggcgtttgaagccgttaaccatttgctg
cagctcgggcatcgtcgtatcgcctgtattaccgggcctgaagcggttccgctcagccag
tatcggctgcagggttatattcaggcgctgcgccgcagcagcatccccgttgaaccgatg
tttatcgtacgcggtgatttctcgtttgaagccggtgcccgcgccctgaaacagctgatg
agtctgccgcagcccccggaagcgctattctgtcacagcgatctgatggcgctgggcgcc
atgaatcaggcgcgcaaactggggatgcgcattccgcaggatctctccatcgttggcttt
gatgatattgagctggcgcgctattacgaaccgcccctgactaccgtggcgcagccgcgc
tttgatattggccgcgaagcgatgctgctgctgctggatgagctgcagggcaagcgggta
aataatggttcgcgcctgctggatgcagaactgcgcgtgcgcggcagtacagcaccggct
aaaaagcgttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system