KEGG   Pantoea sp. PSNIH1: PSNIH1_10565
Entry
PSNIH1_10565      CDS       T03464                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
pant  Pantoea sp. PSNIH1
Pathway
pant03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pant00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PSNIH1_10565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pant03400]
    PSNIH1_10565
DNA repair and recombination proteins [BR:pant03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PSNIH1_10565
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PSNIH1_10565
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_33 UB2H UvrD-helicase DUF87 SBDS_domain_II AAA_22
Other DBs
NCBI-ProteinID: AIX50640
Position
2206202..2208223
AA seq 673 aa
MSKVFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDAAVNEHIE
QMRLSATKAMLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDDMALRVELFDEEVERLSLFDPLTGQIESVIPR
FTIYPKTHYVTPRERILQAMEEIKDELALRRKVLLENNKLLEEQRITQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLRFEEFEALAPQTIYVSATPGKYELEKSGTEVIDQVVRPTGLLD
PILEVRPVGTQVDDLLSEIRKRVEINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYADKITPSMARAIEETERRREKQERYNTEHGIVPQGLNKKITDILELG
KNVVKTRGKGKTATRTAAENDADYLALTPQAMQKKIHELEAQMQQHAQNLEFEEAASLRD
RLHELRELFIAAS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgagcaaagtctttaaactcaactccgcctttaagccttcaggcgatcagcctgaagcg
atccgccgtctggaggaggggctggaagatggccttgcgcatcagaccctgctcggcgta
acgggatcgggcaaaacctttaccgttgccaatgtgattgccgatctcaaccggccgacg
atggttctggcgcctaataaaacgctggcggcgcagctctatggggagatgaaagagttt
tttccggacaacgcggtagaatttttcgtctcttactatgactactatcagcctgaagcc
tatgtgccgagttctgacacctttattgaaaaagatgcggcggtgaacgagcacattgag
cagatgcgcctctccgccaccaaagcgatgctggaacgacgcgatgtcatcgtggtcgcg
tcggtctcggcaatttatggtctgggcgatcccgatctctatctgaaaatgatgctgcat
ctgacgcgcggtatgatcatcgatcagcgcagtattttacggcgtctggctgagctgcag
tatgcgcgtaacgatcaggcgtttcagcgcggtacgttccgcgtgcgcggggaggtgatc
gatatcttcccggcggagtccgacgatatggctctgcgggtggagctgtttgatgaagag
gttgagcggctctcactatttgatccgcttaccggacaaattgagtcagtgatcccgcgc
tttaccatctatcccaaaacgcactacgttacgccgcgcgagcgcatcctgcaggcgatg
gaagagatcaaagatgagctggccctgcgccgtaaggtgctgctggaaaacaacaagctg
ctggaagagcagcgcattacgcagcgcacccagtttgacctggagatgatgaacgagctg
ggttactgctcggggattgagaactactcccgctatctctcgggacgcggaccgggtgaa
gcgccgccgaccctgtttgactatctgccggccgatggtctgctggtggtggatgagtcg
cacgtcacgattccgcagattggcggcatgtatcgcggcgaccgcgcgcgtaaagagacg
ctggtggagtacggcttccgcctgccgtccgcgctggacaaccgtccgcttcggtttgaa
gagtttgaggcgctggccccgcagaccatttatgtctccgccacgccgggtaaatatgag
ctggaaaaatcgggcacggaagtgatcgatcaggtagtgcgtccgacaggtctgctcgat
cccattcttgaggtgcgcccggtcggcacacaggtggatgatctgctctctgaaatccgc
aaacgcgtggagatcaacgaacgcgtgctggtgacgacgctgaccaagcgtatggctgaa
gacctcactgaatatcttgaagagcatggtgagaaggtgcgctatctgcactctgatatc
gataccgttgagcgcatggagattattcgcgacctgcgcctgggcgagtttgacgtgctg
gtagggattaacctgctgcgtgagggacttgatatgccggaggtctccctggtggcgatt
ctcgacgccgacaaagagggcttcctgcgttcagaacgctccctgatccagacgattggt
cgtgcagcgcgtaacgtgaacggcaaagcgattctttatgctgataaaatcacgccctct
atggcacgcgcgattgaagagacagagcgacgtcgcgagaagcaggagcgctacaacacc
gagcacggcattgtgccgcaggggctgaataagaagatcacggatattcttgagctgggc
aaaaacgtggtgaaaacgcgcggcaaaggcaaaacggccacgcgcacggcagcagagaat
gatgctgattacctggcgcttacgccacaggcgatgcagaagaaaattcacgaactggaa
gcgcagatgcagcagcatgcgcaaaacctggagtttgaagaagccgccagcctgcgcgac
cggctgcatgagctgcgcgaactgtttattgccgcctcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (20)   

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