KEGG   Pantoea sp. At-9b: Pat9b_5271
Entry
Pat9b_5271        CDS       T01386                                 
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
  KO
K02032  peptide/nickel transport system ATP-binding protein
Organism
pao  Pantoea sp. At-9b
Pathway
pao02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pao00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pat9b_5271
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pao02000]
    Pat9b_5271
Transporters [BR:pao02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Pat9b_5271
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 AAA_22 AAA_16 SMC_N NACHT RsgA_GTPase AAA_5 ABC_ATPase AAA_29 AAA_30 Sigma54_activat AAA_13 AAA_25 nSTAND1 nSTAND3 Mg_chelatase RNA_helicase PRK Rad17 NB-ARC AAA_23 ATP-synt_ab SbcC_Walker_B AAA_7 AAA_18 DUF87
Other DBs
NCBI-ProteinID: ADU71430
UniProt: E6WK18
Position
pPAT9B01:complement(147421..148350)
AA seq 309 aa
MSEMLLELRDVHVNFPLRRNWLGRITEQAHALNGLDLQLKRGETLGIVGESGCGKSTLAQ
LLMGMLQPQQGQCQRAAPASGTMQMVFQDPLSSLDPRLPVWRIITEPVWIQQRMKAAARR
QLAAELAQRVGIRPEYLDRLPHAFSGGQRQRIAIARALSSNPQIIVLDEPTSALDISVQA
QILNLLVTLQQQRNLTYVLISHNVSVVRHMSDRVAVMYLGQIVELGKADQVLTRPQHPYT
QLLLASVPDIHQPLAEHIALRKTDLPGNRVLPDGCYFRDRCPLAQQACGTPQPLRVVAEE
RAVRCWQVE
NT seq 930 nt   +upstreamnt  +downstreamnt
atgtctgagatgctgctggaactgcgcgatgtgcacgtgaatttcccgctgcgccgcaac
tggctggggcgtatcaccgaacaggcccatgccctgaatggcctcgatttgcagctaaaa
cgcggtgaaacgctgggtattgtcggcgaatcgggttgcggcaaaagtaccctcgcccag
ctattgatggggatgttgcaaccgcagcagggccagtgccagcgcgccgcccccgcatcg
ggcaccatgcaaatggtgtttcaggacccgctgtcatcactcgatccgcgcttaccggtg
tggcgtatcatcaccgaaccagtgtggattcagcagcgcatgaaagcggcggcgcgccgc
cagctggcagcagagctagcgcaacgggtggggattcgcccggaataccttgatcgcctg
ccgcacgccttctccggggggcagcgccagcgaatcgccattgcccgcgccctctcctcc
aatccgcagattatcgtgttggatgaaccgacctccgcgctggatatctcggtacaggcg
cagatcctcaatctgttggtcacgctccagcagcagcgcaatctgacttacgtactgatt
tcgcataacgtctcagtggtgcgtcatatgagcgatcgcgtggcggtgatgtatctcggg
cagattgttgaactgggcaaagcagaccaggtcctgacgcgcccacagcatccctatacg
cagctgttgctggcctcagtgcctgacatccatcaaccgctggcggaacatatcgcgtta
cgcaaaacggatttgccgggtaaccgtgtgttacccgacggctgctattttcgcgatcgc
tgcccgctggcacagcaggcttgtggcacccctcagccattgcgggtagtggcagaagaa
cgcgcggtgcgctgctggcaggtggaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (36)   

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