KEGG   Pantoea sp. At-9b: Pat9b_5301
Entry
Pat9b_5301        CDS       T01386                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
pao  Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:pao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pao03009]
    Pat9b_5301
   03016 Transfer RNA biogenesis [BR:pao03016]
    Pat9b_5301
Enzymes [BR:pao01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     Pat9b_5301
    5.4.99.29  23S rRNA pseudouridine746 synthase
     Pat9b_5301
Ribosome biogenesis [BR:pao03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Pat9b_5301
Transfer RNA biogenesis [BR:pao03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    Pat9b_5301
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ADU71460
UniProt: E6WK48
Position
pPAT9B01:complement(176495..177193)
AA seq 232 aa
MAVILDTFIAPPCHEQIETLYQDEHLVLINKPAGLLSLSGKNPQNLDSVHHRLVKIFPGC
TLVHRLDFGTSGLMVIARNKAINAALCQQFSQRSVTKVYSALLCGHLENHEGVIDAAIAK
DPARFPLMSICATHGKPARSRYQVVERFNHELEEGTLLPLTRVQLIPETGRTHQLRIHCQ
LLGHPILGCDLYGGRLLPGSEKAPRLMLHASALNFVHPISGESINARHNSPF
NT seq 699 nt   +upstreamnt  +downstreamnt
atggctgttattcttgatacctttattgccccaccgtgccatgagcagatagaaacgctc
tatcaggacgaacacctggtgctgatcaataaacctgccggactgcttagtctctcgggc
aaaaatccgcaaaatctcgattctgtacatcaccggctggtaaagatttttccgggctgt
accttggtacatcgccttgatttcggtacttccggcttgatggtgattgcgcgcaacaag
gcgatcaacgctgccctgtgccagcaattcagtcaacgtagcgtgaccaaggtttacagt
gcactgctgtgcgggcatctggaaaaccatgaaggggtgatagacgcggcgattgccaaa
gatccagcgcgctttccgctgatgtcgatttgtgccacccacggtaaacccgcccgttcc
cggtatcaggtggttgaacgtttcaatcatgagttggaagagggaacgttactgccgtta
acgcgggtacagctcattcctgagaccgggcgcacccaccaactccgcattcattgtcag
ctgctgggccaccctattttaggctgcgacctgtatggcggtcgcctgctacctggcagt
gaaaaagcccctcgactgatgctgcacgccagtgcgctgaattttgtgcatcccatcagc
ggagagtcaatcaatgcgcgtcacaacagcccgttttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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